Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.04■□□□□ 0.32
UBL4AP11441 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBL4AP11441 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
UBL4AP11441 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
UBL4AP11441 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.03■□□□□ 0.32
UBL4AP11441 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 AC139713.2-201ENST00000641328 2723 ntBASIC17.03■□□□□ 0.32
UBL4AP11441 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.03■□□□□ 0.32
UBL4AP11441 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.03■□□□□ 0.32
UBL4AP11441 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.03■□□□□ 0.32
UBL4AP11441 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.03■□□□□ 0.32
UBL4AP11441 KRT18P41-201ENST00000518924 1277 ntBASIC17.03■□□□□ 0.32
UBL4AP11441 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 CR769767.2-201ENST00000622735 460 ntBASIC17.03■□□□□ 0.32
UBL4AP11441 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 MST1L-201ENST00000442552 2185 ntBASIC17.03■□□□□ 0.32
UBL4AP11441 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UBL4AP11441 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.03■□□□□ 0.32
UBL4AP11441 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.03■□□□□ 0.32
UBL4AP11441 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBL4AP11441 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBL4AP11441 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL4AP11441 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL4AP11441 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.02■□□□□ 0.32
UBL4AP11441 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL4AP11441 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL4AP11441 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL4AP11441 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
UBL4AP11441 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL4AP11441 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
UBL4AP11441 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL4AP11441 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL4AP11441 INGX-201ENST00000359239 846 ntBASIC17.02■□□□□ 0.32
UBL4AP11441 AP000593.1-201ENST00000393668 712 ntBASIC17.02■□□□□ 0.32
UBL4AP11441 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UBL4AP11441 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
UBL4AP11441 WWOX-216ENST00000569818 525 ntBASIC17.02■□□□□ 0.32
UBL4AP11441 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.02■□□□□ 0.32
UBL4AP11441 AC009113.1-201ENST00000570267 2443 ntBASIC17.02■□□□□ 0.32
UBL4AP11441 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBL4AP11441 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBL4AP11441 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBL4AP11441 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
UBL4AP11441 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBL4AP11441 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.02■□□□□ 0.31
UBL4AP11441 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBL4AP11441 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBL4AP11441 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
UBL4AP11441 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBL4AP11441 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBL4AP11441 LINC01568-207ENST00000641790 1380 ntBASIC17.02■□□□□ 0.31
UBL4AP11441 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.01■□□□□ 0.31
UBL4AP11441 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.01■□□□□ 0.31
UBL4AP11441 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.01■□□□□ 0.31
UBL4AP11441 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.01■□□□□ 0.31
UBL4AP11441 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
UBL4AP11441 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.01■□□□□ 0.31
UBL4AP11441 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.01■□□□□ 0.31
UBL4AP11441 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.01■□□□□ 0.31
UBL4AP11441 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
UBL4AP11441 MYLKP1-201ENST00000509077 1580 ntBASIC17.01■□□□□ 0.31
UBL4AP11441 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UBL4AP11441 AC090340.1-201ENST00000620778 4980 ntBASIC17.01■□□□□ 0.31
UBL4AP11441 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL4AP11441 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.01■□□□□ 0.31
UBL4AP11441 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
UBL4AP11441 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms