Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SP9P0CG40 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SP9P0CG40 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.08■□□□□ 0.48
SP9P0CG40 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SP9P0CG40 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SP9P0CG40 AC005593.1-201ENST00000624894 515 ntBASIC18.08■□□□□ 0.48
SP9P0CG40 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SP9P0CG40 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.08■□□□□ 0.48
SP9P0CG40 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SP9P0CG40 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.08■□□□□ 0.48
SP9P0CG40 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.08■□□□□ 0.48
SP9P0CG40 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SP9P0CG40 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.08■□□□□ 0.48
SP9P0CG40 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SP9P0CG40 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.08■□□□□ 0.48
SP9P0CG40 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.08■□□□□ 0.48
SP9P0CG40 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
SP9P0CG40 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.07■□□□□ 0.48
SP9P0CG40 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.07■□□□□ 0.48
SP9P0CG40 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.07■□□□□ 0.48
SP9P0CG40 AC108751.1-201ENST00000490852 363 ntBASIC18.07■□□□□ 0.48
SP9P0CG40 HLA-J-203ENST00000494367 1087 ntBASIC18.07■□□□□ 0.48
SP9P0CG40 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.07■□□□□ 0.48
SP9P0CG40 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.07■□□□□ 0.48
SP9P0CG40 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.07■□□□□ 0.48
SP9P0CG40 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 PGM5P2-202ENST00000637225 1043 ntBASIC18.07■□□□□ 0.48
SP9P0CG40 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.07■□□□□ 0.48
SP9P0CG40 IRX1P1-201ENST00000438849 1838 ntBASIC18.07■□□□□ 0.48
SP9P0CG40 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SP9P0CG40 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.07■□□□□ 0.48
SP9P0CG40 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.07■□□□□ 0.48
SP9P0CG40 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SP9P0CG40 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.06■□□□□ 0.48
SP9P0CG40 AC002310.6-201ENST00000624451 1377 ntBASIC18.06■□□□□ 0.48
SP9P0CG40 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 GABARAPL3-202ENST00000624044 1851 ntBASIC18.06■□□□□ 0.48
SP9P0CG40 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.06■□□□□ 0.48
SP9P0CG40 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.06■□□□□ 0.48
SP9P0CG40 SPCS2P1-201ENST00000561636 679 ntBASIC18.06■□□□□ 0.48
SP9P0CG40 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.06■□□□□ 0.48
SP9P0CG40 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.06■□□□□ 0.48
SP9P0CG40 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.06■□□□□ 0.48
SP9P0CG40 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.06■□□□□ 0.48
SP9P0CG40 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.06■□□□□ 0.48
SP9P0CG40 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.06■□□□□ 0.48
SP9P0CG40 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SP9P0CG40 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.05■□□□□ 0.48
SP9P0CG40 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SP9P0CG40 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.05■□□□□ 0.48
SP9P0CG40 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SP9P0CG40 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SP9P0CG40 MIR149-201ENST00000384879 89 ntBASIC18.05■□□□□ 0.48
SP9P0CG40 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SP9P0CG40 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.05■□□□□ 0.48
SP9P0CG40 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.05■□□□□ 0.48
SP9P0CG40 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.05■□□□□ 0.48
SP9P0CG40 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SP9P0CG40 C20orf181-201ENST00000623918 480 ntBASIC18.05■□□□□ 0.48
SP9P0CG40 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SP9P0CG40 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SP9P0CG40 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SP9P0CG40 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.04■□□□□ 0.48
SP9P0CG40 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms