Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.45□□□□□ -0.58
APOBP04114 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.45□□□□□ -0.58
APOBP04114 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.45□□□□□ -0.58
APOBP04114 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.45□□□□□ -0.58
APOBP04114 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
APOBP04114 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
APOBP04114 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.45□□□□□ -0.58
APOBP04114 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.45□□□□□ -0.58
APOBP04114 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC11.45□□□□□ -0.58
APOBP04114 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.45□□□□□ -0.58
APOBP04114 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
APOBP04114 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
APOBP04114 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
APOBP04114 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.45□□□□□ -0.58
APOBP04114 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.45□□□□□ -0.58
APOBP04114 AL390955.2-201ENST00000603032 514 ntBASIC11.45□□□□□ -0.58
APOBP04114 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
APOBP04114 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC11.45□□□□□ -0.58
APOBP04114 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.44□□□□□ -0.58
APOBP04114 PDPK2P-202ENST00000562415 1191 ntBASIC11.44□□□□□ -0.58
APOBP04114 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.44□□□□□ -0.58
APOBP04114 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.44□□□□□ -0.58
APOBP04114 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.44□□□□□ -0.58
APOBP04114 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.44□□□□□ -0.58
APOBP04114 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
APOBP04114 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC11.44□□□□□ -0.58
APOBP04114 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.44□□□□□ -0.58
APOBP04114 OR7E14P-202ENST00000530490 1290 ntBASIC11.44□□□□□ -0.58
APOBP04114 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
APOBP04114 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.44□□□□□ -0.58
APOBP04114 AC113404.2-201ENST00000507884 177 ntBASIC11.44□□□□□ -0.58
APOBP04114 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.44□□□□□ -0.58
APOBP04114 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 AL157384.1-201ENST00000445995 2473 ntBASIC11.44□□□□□ -0.58
APOBP04114 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOBP04114 ELL2P1-201ENST00000413990 1906 ntBASIC11.44□□□□□ -0.58
APOBP04114 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.43□□□□□ -0.58
APOBP04114 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.43□□□□□ -0.58
APOBP04114 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.43□□□□□ -0.58
APOBP04114 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 UROS-202ENST00000368778 1556 ntTSL 2 BASIC11.43□□□□□ -0.58
APOBP04114 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC11.43□□□□□ -0.58
APOBP04114 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC11.43□□□□□ -0.58
APOBP04114 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.43□□□□□ -0.58
APOBP04114 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.43□□□□□ -0.58
APOBP04114 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC11.43□□□□□ -0.58
APOBP04114 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
APOBP04114 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.43□□□□□ -0.58
APOBP04114 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.43□□□□□ -0.58
APOBP04114 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.43□□□□□ -0.58
APOBP04114 AL139288.1-201ENST00000623748 933 ntBASIC11.43□□□□□ -0.58
APOBP04114 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
APOBP04114 AL163051.1-201ENST00000569214 1512 ntBASIC11.43□□□□□ -0.58
APOBP04114 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.43□□□□□ -0.58
APOBP04114 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.43□□□□□ -0.58
APOBP04114 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.43□□□□□ -0.58
APOBP04114 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.43□□□□□ -0.58
APOBP04114 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOBP04114 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.42□□□□□ -0.58
APOBP04114 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
APOBP04114 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms