Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCRP04035 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.74■□□□□ 0.91
HMGCRP04035 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HMGCRP04035 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HMGCRP04035 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 AC104109.2-201ENST00000602919 1418 ntBASIC20.73■□□□□ 0.91
HMGCRP04035 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.73■□□□□ 0.91
HMGCRP04035 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.73■□□□□ 0.91
HMGCRP04035 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.73■□□□□ 0.91
HMGCRP04035 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.73■□□□□ 0.91
HMGCRP04035 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.73■□□□□ 0.91
HMGCRP04035 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.73■□□□□ 0.91
HMGCRP04035 FAM197Y3-203ENST00000618346 717 ntBASIC20.73■□□□□ 0.91
HMGCRP04035 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HMGCRP04035 TP73-AS1-210ENST00000637775 1455 ntBASIC20.73■□□□□ 0.91
HMGCRP04035 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
HMGCRP04035 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.73■□□□□ 0.91
HMGCRP04035 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCRP04035 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
HMGCRP04035 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGCRP04035 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGCRP04035 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HMGCRP04035 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGCRP04035 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 UPF3AP3-201ENST00000420996 769 ntBASIC20.72■□□□□ 0.91
HMGCRP04035 MED15P5-201ENST00000423150 992 ntBASIC20.72■□□□□ 0.91
HMGCRP04035 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGCRP04035 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGCRP04035 IGHV3-22-201ENST00000520721 359 ntBASIC20.72■□□□□ 0.91
HMGCRP04035 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGCRP04035 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGCRP04035 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGCRP04035 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.72■□□□□ 0.91
HMGCRP04035 AL139424.1-201ENST00000607572 797 ntBASIC20.72■□□□□ 0.91
HMGCRP04035 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 AL158211.5-201ENST00000623583 2518 ntBASIC20.72■□□□□ 0.91
HMGCRP04035 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
HMGCRP04035 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCRP04035 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCRP04035 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.71■□□□□ 0.91
HMGCRP04035 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.71■□□□□ 0.91
HMGCRP04035 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
HMGCRP04035 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HMGCRP04035 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 AC098831.1-202ENST00000438821 336 ntBASIC20.71■□□□□ 0.91
HMGCRP04035 AC005336.2-201ENST00000593183 939 ntBASIC20.71■□□□□ 0.91
HMGCRP04035 AL356488.2-201ENST00000602755 427 ntBASIC20.71■□□□□ 0.91
HMGCRP04035 AC140113.2-201ENST00000604370 208 ntBASIC20.71■□□□□ 0.91
HMGCRP04035 AL355385.1-201ENST00000606123 409 ntBASIC20.71■□□□□ 0.91
HMGCRP04035 AP001269.4-201ENST00000609611 512 ntBASIC20.71■□□□□ 0.91
HMGCRP04035 AC068587.9-201ENST00000641814 219 ntBASIC20.71■□□□□ 0.91
HMGCRP04035 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HMGCRP04035 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HMGCRP04035 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCRP04035 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.91
HMGCRP04035 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.7■□□□□ 0.91
HMGCRP04035 AC112777.1-201ENST00000540175 1423 ntBASIC20.7■□□□□ 0.9
HMGCRP04035 KRT8P50-201ENST00000562022 1438 ntBASIC20.7■□□□□ 0.9
HMGCRP04035 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCRP04035 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCRP04035 Z98044.1-201ENST00000632503 1764 ntBASIC20.7■□□□□ 0.9
HMGCRP04035 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCRP04035 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCRP04035 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms