Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.11■■□□□ 1.13
COL1A1P02452 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.11■■□□□ 1.13
COL1A1P02452 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
COL1A1P02452 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.11■■□□□ 1.13
COL1A1P02452 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC22.1■■□□□ 1.13
COL1A1P02452 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.1■■□□□ 1.13
COL1A1P02452 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.1■■□□□ 1.13
COL1A1P02452 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.1■■□□□ 1.13
COL1A1P02452 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 CROCCP3-202ENST00000420820 1947 ntBASIC22.1■■□□□ 1.13
COL1A1P02452 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL1A1P02452 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.1■■□□□ 1.13
COL1A1P02452 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.1■■□□□ 1.13
COL1A1P02452 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.1■■□□□ 1.13
COL1A1P02452 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
COL1A1P02452 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.09■■□□□ 1.13
COL1A1P02452 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.09■■□□□ 1.13
COL1A1P02452 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.09■■□□□ 1.13
COL1A1P02452 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.09■■□□□ 1.13
COL1A1P02452 GUSBP12-201ENST00000513727 720 ntBASIC22.09■■□□□ 1.13
COL1A1P02452 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.09■■□□□ 1.13
COL1A1P02452 BX640515.1-201ENST00000617215 977 ntBASIC22.09■■□□□ 1.13
COL1A1P02452 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.09■■□□□ 1.13
COL1A1P02452 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.09■■□□□ 1.13
COL1A1P02452 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
COL1A1P02452 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
COL1A1P02452 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.09■■□□□ 1.13
COL1A1P02452 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.09■■□□□ 1.13
COL1A1P02452 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC22.09■■□□□ 1.13
COL1A1P02452 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
COL1A1P02452 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.09■■□□□ 1.13
COL1A1P02452 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL1A1P02452 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL1A1P02452 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
COL1A1P02452 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COL1A1P02452 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.08■■□□□ 1.13
COL1A1P02452 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL1A1P02452 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.08■■□□□ 1.13
COL1A1P02452 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.08■■□□□ 1.13
COL1A1P02452 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
COL1A1P02452 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL1A1P02452 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL1A1P02452 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL1A1P02452 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL1A1P02452 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL1A1P02452 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL1A1P02452 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
COL1A1P02452 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.08■■□□□ 1.12
COL1A1P02452 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
COL1A1P02452 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.08■■□□□ 1.12
COL1A1P02452 NUS1P2-201ENST00000417358 873 ntBASIC22.08■■□□□ 1.12
COL1A1P02452 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
COL1A1P02452 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC22.08■■□□□ 1.12
COL1A1P02452 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.08■■□□□ 1.12
COL1A1P02452 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.08■■□□□ 1.12
COL1A1P02452 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.08■■□□□ 1.12
COL1A1P02452 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.08■■□□□ 1.12
COL1A1P02452 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.07■■□□□ 1.12
COL1A1P02452 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.07■■□□□ 1.12
COL1A1P02452 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.07■■□□□ 1.12
COL1A1P02452 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.07■■□□□ 1.12
COL1A1P02452 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL1A1P02452 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms