Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
MT-CO1P00395 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MT-CO1P00395 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-CO1P00395 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MT-CO1P00395 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 AL499627.1-201ENST00000569373 2188 ntBASIC18.88■□□□□ 0.61
MT-CO1P00395 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-CO1P00395 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
MT-CO1P00395 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
MT-CO1P00395 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 SPDYE13P-201ENST00000445314 798 ntBASIC18.87■□□□□ 0.61
MT-CO1P00395 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.87■□□□□ 0.61
MT-CO1P00395 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.87■□□□□ 0.61
MT-CO1P00395 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-CO1P00395 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.87■□□□□ 0.61
MT-CO1P00395 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.87■□□□□ 0.61
MT-CO1P00395 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
MT-CO1P00395 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.87■□□□□ 0.61
MT-CO1P00395 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
MT-CO1P00395 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.87■□□□□ 0.61
MT-CO1P00395 AL121956.5-201ENST00000625261 221 ntBASIC18.87■□□□□ 0.61
MT-CO1P00395 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MT-CO1P00395 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-CO1P00395 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
MT-CO1P00395 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-CO1P00395 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MT-CO1P00395 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.86■□□□□ 0.61
MT-CO1P00395 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MT-CO1P00395 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-CO1P00395 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 KRT8P50-201ENST00000562022 1438 ntBASIC18.86■□□□□ 0.61
MT-CO1P00395 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MT-CO1P00395 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.86■□□□□ 0.61
MT-CO1P00395 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 HBZP1-201ENST00000354915 429 ntBASIC18.86■□□□□ 0.61
MT-CO1P00395 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.86■□□□□ 0.61
MT-CO1P00395 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-CO1P00395 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.86■□□□□ 0.61
MT-CO1P00395 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MT-CO1P00395 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MT-CO1P00395 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
MT-CO1P00395 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.86■□□□□ 0.61
MT-CO1P00395 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MT-CO1P00395 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MT-CO1P00395 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MT-CO1P00395 AC007613.1-201ENST00000572811 2597 ntBASIC18.86■□□□□ 0.61
MT-CO1P00395 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MT-CO1P00395 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MT-CO1P00395 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MT-CO1P00395 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.85■□□□□ 0.61
MT-CO1P00395 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.85■□□□□ 0.61
MT-CO1P00395 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.85■□□□□ 0.61
MT-CO1P00395 ZNF444P1-201ENST00000559497 298 ntBASIC18.85■□□□□ 0.61
MT-CO1P00395 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.85■□□□□ 0.61
MT-CO1P00395 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.85■□□□□ 0.61
MT-CO1P00395 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.85■□□□□ 0.61
MT-CO1P00395 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.85■□□□□ 0.61
MT-CO1P00395 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.85■□□□□ 0.61
MT-CO1P00395 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
MT-CO1P00395 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MT-CO1P00395 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.85■□□□□ 0.61
MT-CO1P00395 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MT-CO1P00395 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms