Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD3O95983 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD3O95983 AD000864.1-201ENST00000624076 2295 ntBASIC21.13■□□□□ 0.97
MBD3O95983 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MBD3O95983 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.13■□□□□ 0.97
MBD3O95983 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.13■□□□□ 0.97
MBD3O95983 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MBD3O95983 PHGDH-209ENST00000641074 1780 ntBASIC21.13■□□□□ 0.97
MBD3O95983 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD3O95983 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MBD3O95983 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.12■□□□□ 0.97
MBD3O95983 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
MBD3O95983 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MBD3O95983 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD3O95983 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD3O95983 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.12■□□□□ 0.97
MBD3O95983 MIR4758-201ENST00000577688 71 ntBASIC21.12■□□□□ 0.97
MBD3O95983 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.12■□□□□ 0.97
MBD3O95983 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.12■□□□□ 0.97
MBD3O95983 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3O95983 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD3O95983 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.12■□□□□ 0.97
MBD3O95983 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.11■□□□□ 0.97
MBD3O95983 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.11■□□□□ 0.97
MBD3O95983 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MBD3O95983 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
MBD3O95983 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.11■□□□□ 0.97
MBD3O95983 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MBD3O95983 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MBD3O95983 AP000593.1-201ENST00000393668 712 ntBASIC21.11■□□□□ 0.97
MBD3O95983 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MBD3O95983 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.11■□□□□ 0.97
MBD3O95983 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.11■□□□□ 0.97
MBD3O95983 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.11■□□□□ 0.97
MBD3O95983 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MBD3O95983 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
MBD3O95983 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.11■□□□□ 0.97
MBD3O95983 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MBD3O95983 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3O95983 AC084018.2-201ENST00000613093 2607 ntBASIC21.1■□□□□ 0.97
MBD3O95983 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.1■□□□□ 0.97
MBD3O95983 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.1■□□□□ 0.97
MBD3O95983 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.1■□□□□ 0.97
MBD3O95983 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.1■□□□□ 0.97
MBD3O95983 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.1■□□□□ 0.97
MBD3O95983 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.1■□□□□ 0.97
MBD3O95983 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.1■□□□□ 0.97
MBD3O95983 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 AC083906.2-201ENST00000511578 360 ntBASIC21.1■□□□□ 0.97
MBD3O95983 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.1■□□□□ 0.97
MBD3O95983 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.1■□□□□ 0.97
MBD3O95983 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.1■□□□□ 0.97
MBD3O95983 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.1■□□□□ 0.97
MBD3O95983 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
MBD3O95983 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.1■□□□□ 0.97
MBD3O95983 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 AL023806.1-201ENST00000603994 1649 ntBASIC21.1■□□□□ 0.97
MBD3O95983 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3O95983 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MBD3O95983 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MBD3O95983 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
MBD3O95983 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms