Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CLIC3O95833 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC3O95833 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CLIC3O95833 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC3O95833 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIC3O95833 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIC3O95833 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLIC3O95833 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC3O95833 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC3O95833 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
CLIC3O95833 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC3O95833 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC3O95833 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC3O95833 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC3O95833 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.02■□□□□ 0.32
CLIC3O95833 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIC3O95833 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CLIC3O95833 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIC3O95833 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CLIC3O95833 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CLIC3O95833 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC3O95833 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC3O95833 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.02■□□□□ 0.31
CLIC3O95833 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC3O95833 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLIC3O95833 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
CLIC3O95833 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLIC3O95833 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIC3O95833 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC3O95833 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CLIC3O95833 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLIC3O95833 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIC3O95833 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC3O95833 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC3O95833 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 AC006116.8-202ENST00000587620 1550 ntBASIC17.01■□□□□ 0.31
CLIC3O95833 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIC3O95833 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIC3O95833 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLIC3O95833 CICP6-201ENST00000457191 2729 ntBASIC17.01■□□□□ 0.31
CLIC3O95833 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLIC3O95833 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.01■□□□□ 0.31
CLIC3O95833 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLIC3O95833 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.01■□□□□ 0.31
CLIC3O95833 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17■□□□□ 0.31
CLIC3O95833 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLIC3O95833 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17■□□□□ 0.31
CLIC3O95833 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLIC3O95833 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17■□□□□ 0.31
CLIC3O95833 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 PCDH8P1-201ENST00000428983 2773 ntBASIC17■□□□□ 0.31
CLIC3O95833 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17■□□□□ 0.31
CLIC3O95833 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17■□□□□ 0.31
CLIC3O95833 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLIC3O95833 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CLIC3O95833 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLIC3O95833 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLIC3O95833 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17■□□□□ 0.31
CLIC3O95833 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17■□□□□ 0.31
CLIC3O95833 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17■□□□□ 0.31
CLIC3O95833 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17■□□□□ 0.31
CLIC3O95833 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLIC3O95833 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLIC3O95833 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLIC3O95833 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.99■□□□□ 0.31
CLIC3O95833 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLIC3O95833 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms