Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH8O95206 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH8O95206 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PCDH8O95206 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH8O95206 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH8O95206 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH8O95206 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDH8O95206 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH8O95206 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PCDH8O95206 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH8O95206 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH8O95206 AC012313.10-201ENST00000623509 926 ntBASIC18.38■□□□□ 0.53
PCDH8O95206 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH8O95206 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH8O95206 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH8O95206 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH8O95206 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH8O95206 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH8O95206 AP002383.4-201ENST00000442518 975 ntBASIC18.37■□□□□ 0.53
PCDH8O95206 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH8O95206 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH8O95206 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH8O95206 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH8O95206 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH8O95206 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDH8O95206 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH8O95206 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH8O95206 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH8O95206 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 RNF165-205ENST00000588679 2904 ntBASIC18.36■□□□□ 0.53
PCDH8O95206 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH8O95206 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDH8O95206 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH8O95206 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH8O95206 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH8O95206 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH8O95206 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH8O95206 GPR32P1-201ENST00000601788 811 ntBASIC18.36■□□□□ 0.53
PCDH8O95206 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH8O95206 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDH8O95206 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH8O95206 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDH8O95206 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH8O95206 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
PCDH8O95206 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH8O95206 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH8O95206 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PCDH8O95206 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH8O95206 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH8O95206 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDH8O95206 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH8O95206 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH8O95206 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH8O95206 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH8O95206 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH8O95206 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH8O95206 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH8O95206 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms