Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT1O95170 MTMR9LP-203ENST00000426597 1545 ntBASIC16.45■□□□□ 0.22
CDRT1O95170 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDRT1O95170 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT1O95170 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDRT1O95170 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.44■□□□□ 0.22
CDRT1O95170 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.44■□□□□ 0.22
CDRT1O95170 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.44■□□□□ 0.22
CDRT1O95170 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.44■□□□□ 0.22
CDRT1O95170 AC097658.1-201ENST00000475555 843 ntBASIC16.44■□□□□ 0.22
CDRT1O95170 MYC-208ENST00000641036 567 ntBASIC16.44■□□□□ 0.22
CDRT1O95170 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDRT1O95170 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDRT1O95170 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT1O95170 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.43■□□□□ 0.22
CDRT1O95170 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.43■□□□□ 0.22
CDRT1O95170 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDRT1O95170 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDRT1O95170 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.43■□□□□ 0.22
CDRT1O95170 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CDRT1O95170 TSPY6P-201ENST00000448518 926 ntBASIC16.43■□□□□ 0.22
CDRT1O95170 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.43■□□□□ 0.22
CDRT1O95170 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.43■□□□□ 0.22
CDRT1O95170 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.43■□□□□ 0.22
CDRT1O95170 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.43■□□□□ 0.22
CDRT1O95170 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.43■□□□□ 0.22
CDRT1O95170 MIR4758-201ENST00000577688 71 ntBASIC16.43■□□□□ 0.22
CDRT1O95170 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDRT1O95170 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.43■□□□□ 0.22
CDRT1O95170 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT1O95170 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.43■□□□□ 0.22
CDRT1O95170 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.42■□□□□ 0.22
CDRT1O95170 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDRT1O95170 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDRT1O95170 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDRT1O95170 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.42■□□□□ 0.22
CDRT1O95170 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.42■□□□□ 0.22
CDRT1O95170 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.42■□□□□ 0.22
CDRT1O95170 PNMA6B-201ENST00000538162 1200 ntBASIC16.42■□□□□ 0.22
CDRT1O95170 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.42■□□□□ 0.22
CDRT1O95170 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 HLA-B-256ENST00000639848 1089 ntBASIC16.42■□□□□ 0.22
CDRT1O95170 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDRT1O95170 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDRT1O95170 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDRT1O95170 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 PP12613-201ENST00000424958 2230 ntBASIC16.42■□□□□ 0.22
CDRT1O95170 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 RCC2P6-201ENST00000526625 1557 ntBASIC16.42■□□□□ 0.22
CDRT1O95170 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDRT1O95170 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms