Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.1■□□□□ 0.01
SCAF4O95104 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.1■□□□□ 0.01
SCAF4O95104 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.1■□□□□ 0.01
SCAF4O95104 TUBB8P6-201ENST00000436895 1288 ntBASIC15.1■□□□□ 0.01
SCAF4O95104 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.1■□□□□ 0.01
SCAF4O95104 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.1■□□□□ 0.01
SCAF4O95104 KRT18P16-201ENST00000510337 1294 ntBASIC15.1■□□□□ 0.01
SCAF4O95104 UNC93B5-201ENST00000530315 699 ntBASIC15.1■□□□□ 0.01
SCAF4O95104 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SCAF4O95104 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.1■□□□□ 0.01
SCAF4O95104 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
SCAF4O95104 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.09■□□□□ 0.01
SCAF4O95104 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SCAF4O95104 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SCAF4O95104 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.09■□□□□ 0.01
SCAF4O95104 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.09■□□□□ 0.01
SCAF4O95104 ESRRAP1-201ENST00000400596 1257 ntBASIC15.09■□□□□ 0.01
SCAF4O95104 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.09■□□□□ 0.01
SCAF4O95104 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SCAF4O95104 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.09■□□□□ 0.01
SCAF4O95104 AP003097.1-201ENST00000530657 1135 ntBASIC15.09■□□□□ 0.01
SCAF4O95104 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.09■□□□□ 0.01
SCAF4O95104 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.09■□□□□ 0.01
SCAF4O95104 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SCAF4O95104 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.09■□□□□ 0.01
SCAF4O95104 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SCAF4O95104 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SCAF4O95104 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCAF4O95104 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.08■□□□□ 0.01
SCAF4O95104 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCAF4O95104 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SCAF4O95104 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCAF4O95104 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.08■□□□□ 0.01
SCAF4O95104 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCAF4O95104 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SCAF4O95104 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.08■□□□□ 0.01
SCAF4O95104 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
SCAF4O95104 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCAF4O95104 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.08■□□□□ 0.01
SCAF4O95104 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SCAF4O95104 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.08■□□□□ 0
SCAF4O95104 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.08■□□□□ 0
SCAF4O95104 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SCAF4O95104 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.08■□□□□ 0
SCAF4O95104 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SCAF4O95104 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.08■□□□□ 0
SCAF4O95104 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.08■□□□□ 0
SCAF4O95104 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.08■□□□□ 0
SCAF4O95104 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SCAF4O95104 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms