Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFPL1O75677 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.51■□□□□ 0.55
RFPL1O75677 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.51■□□□□ 0.55
RFPL1O75677 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
RFPL1O75677 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.51■□□□□ 0.55
RFPL1O75677 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.51■□□□□ 0.55
RFPL1O75677 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.51■□□□□ 0.55
RFPL1O75677 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFPL1O75677 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFPL1O75677 GNAS-203ENST00000306120 1878 ntBASIC18.51■□□□□ 0.55
RFPL1O75677 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.51■□□□□ 0.55
RFPL1O75677 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RFPL1O75677 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RFPL1O75677 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.51■□□□□ 0.55
RFPL1O75677 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFPL1O75677 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.51■□□□□ 0.55
RFPL1O75677 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RFPL1O75677 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.5■□□□□ 0.55
RFPL1O75677 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.5■□□□□ 0.55
RFPL1O75677 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.5■□□□□ 0.55
RFPL1O75677 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFPL1O75677 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFPL1O75677 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFPL1O75677 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.49■□□□□ 0.55
RFPL1O75677 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.49■□□□□ 0.55
RFPL1O75677 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RFPL1O75677 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.49■□□□□ 0.55
RFPL1O75677 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.49■□□□□ 0.55
RFPL1O75677 AC004951.3-201ENST00000418645 1148 ntBASIC18.49■□□□□ 0.55
RFPL1O75677 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
RFPL1O75677 AC008040.2-201ENST00000461049 708 ntBASIC18.49■□□□□ 0.55
RFPL1O75677 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.49■□□□□ 0.55
RFPL1O75677 CKBP1-201ENST00000565489 1086 ntBASIC18.49■□□□□ 0.55
RFPL1O75677 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RFPL1O75677 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.49■□□□□ 0.55
RFPL1O75677 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.49■□□□□ 0.55
RFPL1O75677 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 AP000525.1-201ENST00000608286 694 ntBASIC18.49■□□□□ 0.55
RFPL1O75677 REXO1L10P-201ENST00000615707 1290 ntBASIC18.49■□□□□ 0.55
RFPL1O75677 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.49■□□□□ 0.55
RFPL1O75677 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RFPL1O75677 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RFPL1O75677 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFPL1O75677 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.48■□□□□ 0.55
RFPL1O75677 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.48■□□□□ 0.55
RFPL1O75677 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RFPL1O75677 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.48■□□□□ 0.55
RFPL1O75677 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.48■□□□□ 0.55
RFPL1O75677 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RFPL1O75677 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.48■□□□□ 0.55
RFPL1O75677 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.48■□□□□ 0.55
RFPL1O75677 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RFPL1O75677 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RFPL1O75677 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.48■□□□□ 0.55
RFPL1O75677 MIR1238-201ENST00000408483 83 ntBASIC18.48■□□□□ 0.55
RFPL1O75677 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.48■□□□□ 0.55
RFPL1O75677 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.48■□□□□ 0.55
RFPL1O75677 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.48■□□□□ 0.55
RFPL1O75677 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFPL1O75677 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RFPL1O75677 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms