Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AL133373.2-201ENST00000623187 2828 ntBASIC19.17■□□□□ 0.66
LRCH4O75427 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 ECEL1P3-201ENST00000427961 737 ntBASIC19.17■□□□□ 0.66
LRCH4O75427 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.17■□□□□ 0.66
LRCH4O75427 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH4O75427 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.17■□□□□ 0.66
LRCH4O75427 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRCH4O75427 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 MIR3180-4-201ENST00000582223 153 ntBASIC19.17■□□□□ 0.66
LRCH4O75427 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 AC010240.3-201ENST00000607688 395 ntBASIC19.17■□□□□ 0.66
LRCH4O75427 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH4O75427 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH4O75427 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH4O75427 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH4O75427 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.16■□□□□ 0.66
LRCH4O75427 PHGDH-209ENST00000641074 1780 ntBASIC19.16■□□□□ 0.66
LRCH4O75427 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.16■□□□□ 0.66
LRCH4O75427 REXO1L9P-201ENST00000604264 2108 ntBASIC19.16■□□□□ 0.66
LRCH4O75427 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRCH4O75427 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
LRCH4O75427 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRCH4O75427 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.16■□□□□ 0.66
LRCH4O75427 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.16■□□□□ 0.66
LRCH4O75427 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
LRCH4O75427 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.16■□□□□ 0.66
LRCH4O75427 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.16■□□□□ 0.66
LRCH4O75427 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.16■□□□□ 0.66
LRCH4O75427 NEK4P2-201ENST00000580004 1012 ntBASIC19.16■□□□□ 0.66
LRCH4O75427 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.16■□□□□ 0.66
LRCH4O75427 AC024243.1-201ENST00000609234 778 ntBASIC19.16■□□□□ 0.66
LRCH4O75427 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.16■□□□□ 0.66
LRCH4O75427 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LRCH4O75427 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH4O75427 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRCH4O75427 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRCH4O75427 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
LRCH4O75427 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.15■□□□□ 0.66
LRCH4O75427 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LRCH4O75427 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRCH4O75427 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LRCH4O75427 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRCH4O75427 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.15■□□□□ 0.66
LRCH4O75427 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.15■□□□□ 0.66
LRCH4O75427 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.15■□□□□ 0.66
LRCH4O75427 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRCH4O75427 AL096828.2-201ENST00000567259 1965 ntBASIC19.15■□□□□ 0.66
LRCH4O75427 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH4O75427 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
LRCH4O75427 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRCH4O75427 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRCH4O75427 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LRCH4O75427 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRCH4O75427 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
LRCH4O75427 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 NOC2LP2-201ENST00000407594 1944 ntBASIC19.14■□□□□ 0.65
LRCH4O75427 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.14■□□□□ 0.65
LRCH4O75427 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRCH4O75427 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.14■□□□□ 0.65
LRCH4O75427 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms