Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.6■□□□□ 0.25
PTP4A3O75365 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A3O75365 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.6■□□□□ 0.25
PTP4A3O75365 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A3O75365 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A3O75365 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PTP4A3O75365 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTP4A3O75365 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.6■□□□□ 0.25
PTP4A3O75365 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTP4A3O75365 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.6■□□□□ 0.25
PTP4A3O75365 AP005242.2-201ENST00000580065 1175 ntBASIC16.6■□□□□ 0.25
PTP4A3O75365 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.6■□□□□ 0.25
PTP4A3O75365 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A3O75365 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.6■□□□□ 0.25
PTP4A3O75365 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTP4A3O75365 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTP4A3O75365 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.6■□□□□ 0.25
PTP4A3O75365 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A3O75365 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A3O75365 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A3O75365 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.6■□□□□ 0.25
PTP4A3O75365 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTP4A3O75365 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A3O75365 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.59■□□□□ 0.25
PTP4A3O75365 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.59■□□□□ 0.25
PTP4A3O75365 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.59■□□□□ 0.25
PTP4A3O75365 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTP4A3O75365 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.59■□□□□ 0.25
PTP4A3O75365 AL355355.2-201ENST00000442321 338 ntBASIC16.59■□□□□ 0.25
PTP4A3O75365 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.59■□□□□ 0.25
PTP4A3O75365 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTP4A3O75365 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.59■□□□□ 0.25
PTP4A3O75365 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 HOXB1-202ENST00000577092 1414 ntBASIC16.59■□□□□ 0.25
PTP4A3O75365 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTP4A3O75365 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTP4A3O75365 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.59■□□□□ 0.25
PTP4A3O75365 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PTP4A3O75365 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTP4A3O75365 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTP4A3O75365 GNAS-203ENST00000306120 1878 ntBASIC16.59■□□□□ 0.25
PTP4A3O75365 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A3O75365 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.58■□□□□ 0.25
PTP4A3O75365 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A3O75365 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A3O75365 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.58■□□□□ 0.25
PTP4A3O75365 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PTP4A3O75365 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTP4A3O75365 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.58■□□□□ 0.24
PTP4A3O75365 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.58■□□□□ 0.24
PTP4A3O75365 AL158047.1-201ENST00000445918 881 ntBASIC16.58■□□□□ 0.24
PTP4A3O75365 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.58■□□□□ 0.24
PTP4A3O75365 AC026471.5-201ENST00000615068 467 ntBASIC16.58■□□□□ 0.24
PTP4A3O75365 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PTP4A3O75365 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.58■□□□□ 0.24
PTP4A3O75365 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PTP4A3O75365 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PTP4A3O75365 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTP4A3O75365 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.58■□□□□ 0.24
PTP4A3O75365 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTP4A3O75365 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTP4A3O75365 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms