Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RIPK2O43353 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.72■□□□□ 0.59
RIPK2O43353 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.72■□□□□ 0.59
RIPK2O43353 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 AC091390.4-202ENST00000476426 537 ntBASIC18.72■□□□□ 0.59
RIPK2O43353 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.72■□□□□ 0.59
RIPK2O43353 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 AC008403.3-201ENST00000598924 454 ntBASIC18.72■□□□□ 0.59
RIPK2O43353 AC131212.4-201ENST00000623606 975 ntBASIC18.72■□□□□ 0.59
RIPK2O43353 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RIPK2O43353 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RIPK2O43353 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 HCG11-201ENST00000411553 5696 ntBASIC18.71■□□□□ 0.59
RIPK2O43353 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.71■□□□□ 0.59
RIPK2O43353 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.71■□□□□ 0.59
RIPK2O43353 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.71■□□□□ 0.59
RIPK2O43353 UNC93B5-201ENST00000530315 699 ntBASIC18.71■□□□□ 0.59
RIPK2O43353 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.71■□□□□ 0.59
RIPK2O43353 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.71■□□□□ 0.59
RIPK2O43353 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RIPK2O43353 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RIPK2O43353 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RIPK2O43353 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.71■□□□□ 0.59
RIPK2O43353 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPK2O43353 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
RIPK2O43353 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RIPK2O43353 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RIPK2O43353 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RIPK2O43353 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RIPK2O43353 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RIPK2O43353 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RIPK2O43353 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.7■□□□□ 0.58
RIPK2O43353 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.7■□□□□ 0.58
RIPK2O43353 AP000593.1-201ENST00000393668 712 ntBASIC18.7■□□□□ 0.58
RIPK2O43353 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 AC069152.1-201ENST00000438030 544 ntBASIC18.7■□□□□ 0.58
RIPK2O43353 KRT16P5-201ENST00000455284 522 ntBASIC18.7■□□□□ 0.58
RIPK2O43353 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.7■□□□□ 0.58
RIPK2O43353 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 AC133041.1-202ENST00000642053 222 ntBASIC18.7■□□□□ 0.58
RIPK2O43353 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms