Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.17□□□□□ -0.3
PAX4O43316 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.17□□□□□ -0.3
PAX4O43316 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.17□□□□□ -0.3
PAX4O43316 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PAX4O43316 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PAX4O43316 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 AC068587.9-201ENST00000641814 219 ntBASIC13.17□□□□□ -0.3
PAX4O43316 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.17□□□□□ -0.3
PAX4O43316 Z98044.1-201ENST00000632503 1764 ntBASIC13.17□□□□□ -0.3
PAX4O43316 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PAX4O43316 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 AC026471.1-201ENST00000564629 3026 ntBASIC13.16□□□□□ -0.3
PAX4O43316 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.16□□□□□ -0.3
PAX4O43316 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 TSPY14P-201ENST00000303979 915 ntBASIC13.16□□□□□ -0.3
PAX4O43316 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.16□□□□□ -0.3
PAX4O43316 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.16□□□□□ -0.3
PAX4O43316 AL023284.2-201ENST00000405850 579 ntBASIC13.16□□□□□ -0.3
PAX4O43316 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.16□□□□□ -0.3
PAX4O43316 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.16□□□□□ -0.3
PAX4O43316 AC008622.2-201ENST00000617006 1229 ntBASIC13.16□□□□□ -0.3
PAX4O43316 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PAX4O43316 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
PAX4O43316 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.16□□□□□ -0.3
PAX4O43316 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.16□□□□□ -0.3
PAX4O43316 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PAX4O43316 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.16□□□□□ -0.3
PAX4O43316 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.15□□□□□ -0.3
PAX4O43316 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PAX4O43316 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.15□□□□□ -0.3
PAX4O43316 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 AL109659.2-201ENST00000606809 1674 ntBASIC13.15□□□□□ -0.3
PAX4O43316 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
PAX4O43316 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PAX4O43316 AC093503.3-201ENST00000624917 2352 ntBASIC13.15□□□□□ -0.3
PAX4O43316 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.15□□□□□ -0.3
PAX4O43316 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.15□□□□□ -0.3
PAX4O43316 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.15□□□□□ -0.3
PAX4O43316 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PAX4O43316 AP003041.3-201ENST00000527151 707 ntBASIC13.15□□□□□ -0.3
PAX4O43316 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.15□□□□□ -0.3
PAX4O43316 AL023803.3-201ENST00000615559 522 ntBASIC13.15□□□□□ -0.3
PAX4O43316 AC010653.2-201ENST00000623505 997 ntBASIC13.15□□□□□ -0.3
PAX4O43316 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.15□□□□□ -0.3
PAX4O43316 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PAX4O43316 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms