Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.42■■□□□ 1.34
ABCC4O15439 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
ABCC4O15439 MADD-208ENST00000405573 1823 ntTSL 5 BASIC23.42■■□□□ 1.34
ABCC4O15439 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.41■■□□□ 1.34
ABCC4O15439 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.41■■□□□ 1.34
ABCC4O15439 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.41■■□□□ 1.34
ABCC4O15439 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.41■■□□□ 1.34
ABCC4O15439 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
ABCC4O15439 TSSC2-201ENST00000450217 709 ntBASIC23.41■■□□□ 1.34
ABCC4O15439 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.41■■□□□ 1.34
ABCC4O15439 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.41■■□□□ 1.34
ABCC4O15439 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
ABCC4O15439 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.41■■□□□ 1.34
ABCC4O15439 AC011498.5-201ENST00000592027 486 ntBASIC23.41■■□□□ 1.34
ABCC4O15439 AC079602.3-201ENST00000623931 403 ntBASIC23.41■■□□□ 1.34
ABCC4O15439 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.41■■□□□ 1.34
ABCC4O15439 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.41■■□□□ 1.34
ABCC4O15439 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.41■■□□□ 1.34
ABCC4O15439 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.41■■□□□ 1.34
ABCC4O15439 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
ABCC4O15439 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.41■■□□□ 1.34
ABCC4O15439 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 AC016734.2-201ENST00000624325 1377 ntBASIC23.4■■□□□ 1.34
ABCC4O15439 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 MIR149-201ENST00000384879 89 ntBASIC23.4■■□□□ 1.34
ABCC4O15439 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.4■■□□□ 1.34
ABCC4O15439 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.4■■□□□ 1.34
ABCC4O15439 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.4■■□□□ 1.34
ABCC4O15439 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.4■■□□□ 1.34
ABCC4O15439 AC092329.2-201ENST00000598402 547 ntBASIC23.4■■□□□ 1.34
ABCC4O15439 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
ABCC4O15439 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
ABCC4O15439 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
ABCC4O15439 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ABCC4O15439 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.4■■□□□ 1.34
ABCC4O15439 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.39■■□□□ 1.34
ABCC4O15439 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ABCC4O15439 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
ABCC4O15439 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.39■■□□□ 1.34
ABCC4O15439 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
ABCC4O15439 AP002383.4-201ENST00000442518 975 ntBASIC23.39■■□□□ 1.34
ABCC4O15439 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.39■■□□□ 1.34
ABCC4O15439 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.34
ABCC4O15439 MIR3652-201ENST00000579335 131 ntBASIC23.39■■□□□ 1.34
ABCC4O15439 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.39■■□□□ 1.34
ABCC4O15439 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.39■■□□□ 1.34
ABCC4O15439 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.39■■□□□ 1.33
ABCC4O15439 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
ABCC4O15439 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC23.39■■□□□ 1.33
ABCC4O15439 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.39■■□□□ 1.33
ABCC4O15439 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ABCC4O15439 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC23.39■■□□□ 1.33
ABCC4O15439 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
ABCC4O15439 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC23.39■■□□□ 1.33
ABCC4O15439 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ABCC4O15439 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ABCC4O15439 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
ABCC4O15439 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
ABCC4O15439 MIR3917-201ENST00000580971 93 ntBASIC23.38■■□□□ 1.33
ABCC4O15439 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
ABCC4O15439 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ABCC4O15439 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
ABCC4O15439 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ABCC4O15439 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.38■■□□□ 1.33
ABCC4O15439 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ABCC4O15439 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
ABCC4O15439 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ABCC4O15439 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.38■■□□□ 1.33
ABCC4O15439 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC23.37■■□□□ 1.33
ABCC4O15439 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
ABCC4O15439 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.37■■□□□ 1.33
ABCC4O15439 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.37■■□□□ 1.33
ABCC4O15439 PRELID1P1-202ENST00000567272 903 ntBASIC23.37■■□□□ 1.33
ABCC4O15439 AL121672.3-201ENST00000608644 468 ntBASIC23.37■■□□□ 1.33
ABCC4O15439 AL157888.1-201ENST00000631930 593 ntBASIC23.37■■□□□ 1.33
ABCC4O15439 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 AC009102.3-201ENST00000623118 1491 ntBASIC23.37■■□□□ 1.33
ABCC4O15439 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.37■■□□□ 1.33
ABCC4O15439 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms