Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PFDN6O15212 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PFDN6O15212 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
PFDN6O15212 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.46■□□□□ 0.55
PFDN6O15212 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.46■□□□□ 0.55
PFDN6O15212 TSPY14P-201ENST00000303979 915 ntBASIC18.46■□□□□ 0.55
PFDN6O15212 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.46■□□□□ 0.55
PFDN6O15212 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN6O15212 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.46■□□□□ 0.55
PFDN6O15212 NAPSB-206ENST00000562112 1266 ntBASIC18.46■□□□□ 0.55
PFDN6O15212 AC009065.1-201ENST00000564055 1225 ntBASIC18.46■□□□□ 0.55
PFDN6O15212 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.46■□□□□ 0.55
PFDN6O15212 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PFDN6O15212 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN6O15212 AC092338.2-201ENST00000568827 1415 ntBASIC18.46■□□□□ 0.55
PFDN6O15212 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.46■□□□□ 0.55
PFDN6O15212 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN6O15212 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PFDN6O15212 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.46■□□□□ 0.54
PFDN6O15212 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PFDN6O15212 AL499627.1-201ENST00000569373 2188 ntBASIC18.45■□□□□ 0.54
PFDN6O15212 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PFDN6O15212 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PFDN6O15212 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.45■□□□□ 0.54
PFDN6O15212 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN6O15212 AL390955.1-201ENST00000428694 934 ntBASIC18.45■□□□□ 0.54
PFDN6O15212 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.45■□□□□ 0.54
PFDN6O15212 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.45■□□□□ 0.54
PFDN6O15212 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.45■□□□□ 0.54
PFDN6O15212 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.45■□□□□ 0.54
PFDN6O15212 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.45■□□□□ 0.54
PFDN6O15212 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 LTB4R2-202ENST00000528054 3092 ntBASIC18.45■□□□□ 0.54
PFDN6O15212 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PFDN6O15212 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PFDN6O15212 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN6O15212 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PFDN6O15212 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.44■□□□□ 0.54
PFDN6O15212 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 AC104581.1-202ENST00000635932 2618 ntBASIC18.44■□□□□ 0.54
PFDN6O15212 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PFDN6O15212 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PFDN6O15212 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 MMP23A-201ENST00000234610 1017 ntBASIC18.44■□□□□ 0.54
PFDN6O15212 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PFDN6O15212 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.44■□□□□ 0.54
PFDN6O15212 WWOX-216ENST00000569818 525 ntBASIC18.44■□□□□ 0.54
PFDN6O15212 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PFDN6O15212 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.44■□□□□ 0.54
PFDN6O15212 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.44■□□□□ 0.54
PFDN6O15212 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.44■□□□□ 0.54
PFDN6O15212 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PFDN6O15212 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN6O15212 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.44■□□□□ 0.54
PFDN6O15212 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN6O15212 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN6O15212 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN6O15212 AC036111.1-201ENST00000533973 1582 ntBASIC18.43■□□□□ 0.54
PFDN6O15212 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PFDN6O15212 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms