Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 WWOX-216ENST00000569818 525 ntBASIC16.73■□□□□ 0.27
SMAD9O15198 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 AL138966.2-201ENST00000621997 464 ntBASIC16.73■□□□□ 0.27
SMAD9O15198 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
SMAD9O15198 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.73■□□□□ 0.27
SMAD9O15198 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.73■□□□□ 0.27
SMAD9O15198 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.73■□□□□ 0.27
SMAD9O15198 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMAD9O15198 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SMAD9O15198 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.72■□□□□ 0.27
SMAD9O15198 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.72■□□□□ 0.27
SMAD9O15198 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.72■□□□□ 0.27
SMAD9O15198 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.72■□□□□ 0.27
SMAD9O15198 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 RCN1P1-201ENST00000400413 996 ntBASIC16.72■□□□□ 0.27
SMAD9O15198 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 FAM210CP-201ENST00000445714 574 ntBASIC16.72■□□□□ 0.27
SMAD9O15198 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.72■□□□□ 0.27
SMAD9O15198 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.72■□□□□ 0.27
SMAD9O15198 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.72■□□□□ 0.27
SMAD9O15198 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SMAD9O15198 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.72■□□□□ 0.27
SMAD9O15198 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.72■□□□□ 0.27
SMAD9O15198 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.72■□□□□ 0.27
SMAD9O15198 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.72■□□□□ 0.27
SMAD9O15198 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.72■□□□□ 0.27
SMAD9O15198 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.72■□□□□ 0.27
SMAD9O15198 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMAD9O15198 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SMAD9O15198 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SMAD9O15198 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SMAD9O15198 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SMAD9O15198 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.71■□□□□ 0.27
SMAD9O15198 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SMAD9O15198 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.71■□□□□ 0.27
SMAD9O15198 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.71■□□□□ 0.27
SMAD9O15198 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.71■□□□□ 0.27
SMAD9O15198 AC141257.4-201ENST00000634557 245 ntBASIC16.71■□□□□ 0.27
SMAD9O15198 AC136944.6-201ENST00000634818 245 ntBASIC16.71■□□□□ 0.27
SMAD9O15198 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.71■□□□□ 0.27
SMAD9O15198 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SMAD9O15198 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SMAD9O15198 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SMAD9O15198 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMAD9O15198 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMAD9O15198 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
SMAD9O15198 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SMAD9O15198 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SMAD9O15198 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SMAD9O15198 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMAD9O15198 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.7■□□□□ 0.26
SMAD9O15198 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
SMAD9O15198 AC009947.2-201ENST00000444014 672 ntBASIC16.7■□□□□ 0.26
SMAD9O15198 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms