Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RTCAO00442 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RTCAO00442 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTCAO00442 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 BICD1-207ENST00000551848 1962 ntBASIC17.57■□□□□ 0.4
RTCAO00442 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.57■□□□□ 0.4
RTCAO00442 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RTCAO00442 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.57■□□□□ 0.4
RTCAO00442 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.57■□□□□ 0.4
RTCAO00442 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.57■□□□□ 0.4
RTCAO00442 AC005363.2-201ENST00000618631 242 ntBASIC17.57■□□□□ 0.4
RTCAO00442 AL138966.2-201ENST00000621997 464 ntBASIC17.57■□□□□ 0.4
RTCAO00442 AC141257.4-201ENST00000634557 245 ntBASIC17.57■□□□□ 0.4
RTCAO00442 AC136944.6-201ENST00000634818 245 ntBASIC17.57■□□□□ 0.4
RTCAO00442 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RTCAO00442 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 AC135050.7-201ENST00000624508 2218 ntBASIC17.57■□□□□ 0.4
RTCAO00442 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RTCAO00442 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RTCAO00442 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.57■□□□□ 0.4
RTCAO00442 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 AL163051.1-201ENST00000569214 1512 ntBASIC17.57■□□□□ 0.4
RTCAO00442 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTCAO00442 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTCAO00442 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
RTCAO00442 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTCAO00442 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RTCAO00442 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTCAO00442 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTCAO00442 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.56■□□□□ 0.4
RTCAO00442 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTCAO00442 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTCAO00442 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.56■□□□□ 0.4
RTCAO00442 ESPNP-201ENST00000270691 2015 ntBASIC17.56■□□□□ 0.4
RTCAO00442 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RTCAO00442 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RTCAO00442 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.56■□□□□ 0.4
RTCAO00442 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.56■□□□□ 0.4
RTCAO00442 AL512604.3-201ENST00000569583 964 ntBASIC17.56■□□□□ 0.4
RTCAO00442 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTCAO00442 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTCAO00442 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RTCAO00442 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTCAO00442 AC135776.1-201ENST00000319817 2481 ntBASIC17.56■□□□□ 0.4
RTCAO00442 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.56■□□□□ 0.4
RTCAO00442 KRT8P7-201ENST00000533003 1432 ntBASIC17.55■□□□□ 0.4
RTCAO00442 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.55■□□□□ 0.4
RTCAO00442 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.55■□□□□ 0.4
RTCAO00442 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
RTCAO00442 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTCAO00442 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.55■□□□□ 0.4
RTCAO00442 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.55■□□□□ 0.4
RTCAO00442 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.55■□□□□ 0.4
RTCAO00442 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.55■□□□□ 0.4
RTCAO00442 AC113347.1-201ENST00000413321 391 ntBASIC17.55■□□□□ 0.4
RTCAO00442 LIN28AP1-201ENST00000429574 405 ntBASIC17.55■□□□□ 0.4
RTCAO00442 ATP5G1P1-201ENST00000448724 379 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms