Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC28A1O00337 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC28A1O00337 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
SLC28A1O00337 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC28A1O00337 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC28A1O00337 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 AL355355.2-201ENST00000442321 338 ntBASIC17.75■□□□□ 0.43
SLC28A1O00337 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC28A1O00337 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC28A1O00337 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC28A1O00337 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC28A1O00337 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC28A1O00337 REXO1L10P-201ENST00000615707 1290 ntBASIC17.75■□□□□ 0.43
SLC28A1O00337 REXO1L12P-201ENST00000622156 912 ntBASIC17.75■□□□□ 0.43
SLC28A1O00337 AC113410.3-201ENST00000623366 203 ntBASIC17.75■□□□□ 0.43
SLC28A1O00337 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC28A1O00337 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
SLC28A1O00337 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC28A1O00337 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC28A1O00337 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A1O00337 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC28A1O00337 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SLC28A1O00337 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC28A1O00337 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A1O00337 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A1O00337 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC28A1O00337 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 REXO1L9P-201ENST00000604264 2108 ntBASIC17.74■□□□□ 0.43
SLC28A1O00337 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC28A1O00337 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC28A1O00337 AL158047.1-201ENST00000445918 881 ntBASIC17.74■□□□□ 0.43
SLC28A1O00337 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC28A1O00337 AC233702.5-201ENST00000584107 538 ntBASIC17.74■□□□□ 0.43
SLC28A1O00337 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
SLC28A1O00337 AL049637.2-201ENST00000641778 930 ntBASIC17.74■□□□□ 0.43
SLC28A1O00337 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A1O00337 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A1O00337 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC28A1O00337 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC28A1O00337 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC28A1O00337 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A1O00337 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC28A1O00337 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A1O00337 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC28A1O00337 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC28A1O00337 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 FLJ13224-201ENST00000313737 1514 ntBASIC17.73■□□□□ 0.43
SLC28A1O00337 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC28A1O00337 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC28A1O00337 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC28A1O00337 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC28A1O00337 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC28A1O00337 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC28A1O00337 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms