Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 AL121906.2-201ENST00000621597 723 ntBASIC13.48□□□□□ -0.25
SMKR1H3BMG3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.48□□□□□ -0.25
SMKR1H3BMG3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMKR1H3BMG3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMKR1H3BMG3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 AL512625.2-201ENST00000417533 625 ntBASIC13.46□□□□□ -0.25
SMKR1H3BMG3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 MYC-208ENST00000641036 567 ntBASIC13.46□□□□□ -0.25
SMKR1H3BMG3 AC068587.9-201ENST00000641814 219 ntBASIC13.46□□□□□ -0.25
SMKR1H3BMG3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms