Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB4C9JG80 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 AC008764.6-201ENST00000595909 2069 ntBASIC16.29■□□□□ 0.2
NPIPB4C9JG80 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB4C9JG80 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 LINC01126-201ENST00000623515 1646 ntBASIC16.28■□□□□ 0.2
NPIPB4C9JG80 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 AC087499.1-201ENST00000418141 1075 ntBASIC16.28■□□□□ 0.2
NPIPB4C9JG80 AC024243.1-201ENST00000609234 778 ntBASIC16.28■□□□□ 0.2
NPIPB4C9JG80 AL138966.2-201ENST00000621997 464 ntBASIC16.28■□□□□ 0.2
NPIPB4C9JG80 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 REXO1L9P-201ENST00000604264 2108 ntBASIC16.28■□□□□ 0.2
NPIPB4C9JG80 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPB4C9JG80 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 PVRIG2P-201ENST00000435460 978 ntBASIC16.27■□□□□ 0.2
NPIPB4C9JG80 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.27■□□□□ 0.2
NPIPB4C9JG80 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms