Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 AC136632.2-201ENST00000512891 861 ntBASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.33■■□□□ 1.01
TMEM88BA6NKF7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TMEM88BA6NKF7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.33■■□□□ 1
TMEM88BA6NKF7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TMEM88BA6NKF7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.33■■□□□ 1
TMEM88BA6NKF7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
TMEM88BA6NKF7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMEM88BA6NKF7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 BX005266.1-201ENST00000473402 457 ntBASIC21.32■■□□□ 1
TMEM88BA6NKF7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.32■■□□□ 1
TMEM88BA6NKF7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 AC009154.2-201ENST00000621177 724 ntBASIC21.32■■□□□ 1
TMEM88BA6NKF7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 AL022326.1-202ENST00000641533 845 ntBASIC21.32■■□□□ 1
TMEM88BA6NKF7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TMEM88BA6NKF7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM88BA6NKF7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 AC015922.1-201ENST00000421102 1152 ntBASIC21.31■■□□□ 1
TMEM88BA6NKF7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 AL031432.2-201ENST00000566714 459 ntBASIC21.31■■□□□ 1
TMEM88BA6NKF7 AC018845.2-201ENST00000568326 409 ntBASIC21.31■■□□□ 1
TMEM88BA6NKF7 AL928711.1-201ENST00000570165 459 ntBASIC21.31■■□□□ 1
TMEM88BA6NKF7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 GPR89P-201ENST00000407924 1495 ntBASIC21.31■■□□□ 1
TMEM88BA6NKF7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM88BA6NKF7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TMEM88BA6NKF7 AL163051.1-201ENST00000569214 1512 ntBASIC21.3■■□□□ 1
TMEM88BA6NKF7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 AC012676.1-201ENST00000574705 1949 ntBASIC21.3■■□□□ 1
TMEM88BA6NKF7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 AP000344.2-201ENST00000512987 629 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms