Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC01546A6NGU7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13□□□□□ -0.33
LINC01546A6NGU7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 DOC2GP-204ENST00000639052 2548 ntBASIC13□□□□□ -0.33
LINC01546A6NGU7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13□□□□□ -0.33
LINC01546A6NGU7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13□□□□□ -0.33
LINC01546A6NGU7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LINC01546A6NGU7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13□□□□□ -0.33
LINC01546A6NGU7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 AC093787.1-201ENST00000450396 207 ntBASIC13□□□□□ -0.33
LINC01546A6NGU7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13□□□□□ -0.33
LINC01546A6NGU7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13□□□□□ -0.33
LINC01546A6NGU7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13□□□□□ -0.33
LINC01546A6NGU7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13□□□□□ -0.33
LINC01546A6NGU7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13□□□□□ -0.33
LINC01546A6NGU7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC01546A6NGU7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 AC106886.4-201ENST00000623557 2502 ntBASIC12.99□□□□□ -0.33
LINC01546A6NGU7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 MST1L-201ENST00000442552 2185 ntBASIC12.99□□□□□ -0.33
LINC01546A6NGU7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC01546A6NGU7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 RCC2P3-201ENST00000418112 1537 ntBASIC12.98□□□□□ -0.33
LINC01546A6NGU7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms