Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM49BA6NDI0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 AL096828.2-201ENST00000567259 1965 ntBASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 AC007663.1-201ENST00000438948 1240 ntBASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 PHGDH-209ENST00000641074 1780 ntBASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM49BA6NDI0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 AL163051.1-201ENST00000569214 1512 ntBASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 TSPY17P-201ENST00000450329 467 ntBASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 AC138028.4-201ENST00000564984 1845 ntBASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 CYP2D8P-201ENST00000433633 1490 ntBASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM49BA6NDI0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 KRT18P23-201ENST00000435622 1283 ntBASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM49BA6NDI0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms