Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 TSPY12P-201ENST00000421279 868 ntBASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 KRT16P4-201ENST00000453883 522 ntBASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
CCDC144AA2RUR9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC144AA2RUR9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 AL031598.1-201ENST00000561511 1773 ntBASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 MINOS1P3-201ENST00000457048 203 ntBASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 AC009078.2-202ENST00000463353 338 ntBASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 REXO1L6P-202ENST00000619970 1078 ntBASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC26.37■■□□□ 1.81
CCDC144AA2RUR9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 AC009154.2-201ENST00000621177 724 ntBASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC144AA2RUR9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 AC096582.2-201ENST00000510860 516 ntBASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 LINC01711-201ENST00000598340 967 ntBASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 AC114341.1-201ENST00000618070 349 ntBASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
CCDC144AA2RUR9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 CCS-201ENST00000310190 942 ntTSL 5 BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC144AA2RUR9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms