Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 MTCL1P1-201ENST00000446207 792 ntBASIC21.41■■□□□ 1.02
SSC5DA1L4H1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 AC009154.2-201ENST00000621177 724 ntBASIC21.41■■□□□ 1.02
SSC5DA1L4H1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SSC5DA1L4H1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 UPF3AP3-201ENST00000420996 769 ntBASIC21.4■■□□□ 1.02
SSC5DA1L4H1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 RNA5SP415-201ENST00000517246 115 ntBASIC21.4■■□□□ 1.02
SSC5DA1L4H1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.4■■□□□ 1.02
SSC5DA1L4H1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SSC5DA1L4H1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.39■■□□□ 1.02
SSC5DA1L4H1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 YBX2P1-201ENST00000394192 760 ntBASIC21.39■■□□□ 1.01
SSC5DA1L4H1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 OR7E14P-202ENST00000530490 1290 ntBASIC21.39■■□□□ 1.01
SSC5DA1L4H1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 AC008735.5-201ENST00000623544 497 ntBASIC21.39■■□□□ 1.01
SSC5DA1L4H1 AC083906.6-201ENST00000641366 219 ntBASIC21.39■■□□□ 1.01
SSC5DA1L4H1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.39■■□□□ 1.01
SSC5DA1L4H1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 HLA-J-201ENST00000462773 1622 ntBASIC21.38■■□□□ 1.01
SSC5DA1L4H1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 AL139288.1-201ENST00000623748 933 ntBASIC21.38■■□□□ 1.01
SSC5DA1L4H1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.38■■□□□ 1.01
SSC5DA1L4H1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.37■■□□□ 1.01
SSC5DA1L4H1 AL591424.1-201ENST00000442569 1213 ntBASIC21.37■■□□□ 1.01
SSC5DA1L4H1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms