Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV27A0A0K0K1C4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 AC006116.8-202ENST00000587620 1550 ntBASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 AC108860.2-201ENST00000562760 2183 ntBASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 AL445675.2-201ENST00000620291 557 ntBASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRBV27A0A0K0K1C4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.02□□□□□ -0.32
TRBV27A0A0K0K1C4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 AC131212.4-201ENST00000623606 975 ntBASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 PHGDH-209ENST00000641074 1780 ntBASIC13.02□□□□□ -0.33
TRBV27A0A0K0K1C4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms