Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 RCC2P3-201ENST00000418112 1537 ntBASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV5A0A0B4J249 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV5A0A0B4J249 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV5A0A0B4J249 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TRAV5A0A0B4J249 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV5A0A0B4J249 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV5A0A0B4J249 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV5A0A0B4J249 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV5A0A0B4J249 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 UNC93B5-201ENST00000530315 699 ntBASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 AC008403.3-201ENST00000598924 454 ntBASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 AL109923.1-201ENST00000618799 583 ntBASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 MYLKP1-201ENST00000509077 1580 ntBASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV5A0A0B4J249 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 MTDHP1-201ENST00000605323 784 ntBASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV5A0A0B4J249 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV5A0A0B4J249 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms