Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 AP000867.3-201ENST00000524675 377 ntBASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV5A0A0B4J1U4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 BCL2-203ENST00000589955 5011 ntBASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 TOB2P1-201ENST00000469761 992 ntBASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRGV5A0A0B4J1U4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 SLC25A24-204ENST00000569674 2357 ntBASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 NUS1P1-201ENST00000446295 882 ntBASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 AL121894.2-201ENST00000602977 491 ntBASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 AC124864.1-201ENST00000623408 392 ntBASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRGV5A0A0B4J1U4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV5A0A0B4J1U4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms