Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC39.17■■■■□ 3.86
CDK11AQ9UQ88 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC39.17■■■■□ 3.86
CDK11AQ9UQ88 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC39.16■■■■□ 3.86
CDK11AQ9UQ88 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
CDK11AQ9UQ88 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
CDK11AQ9UQ88 DUX4L18-201ENST00000553347 1267 ntBASIC39.16■■■■□ 3.86
CDK11AQ9UQ88 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
CDK11AQ9UQ88 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
CDK11AQ9UQ88 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
CDK11AQ9UQ88 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
CDK11AQ9UQ88 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC39.14■■■■□ 3.86
CDK11AQ9UQ88 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC39.14■■■■□ 3.86
CDK11AQ9UQ88 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC39.14■■■■□ 3.86
CDK11AQ9UQ88 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC39.14■■■■□ 3.86
CDK11AQ9UQ88 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC39.14■■■■□ 3.86
CDK11AQ9UQ88 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC39.13■■■■□ 3.86
CDK11AQ9UQ88 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.85
CDK11AQ9UQ88 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC39.12■■■■□ 3.85
CDK11AQ9UQ88 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
CDK11AQ9UQ88 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC39.11■■■■□ 3.85
CDK11AQ9UQ88 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
CDK11AQ9UQ88 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC39.11■■■■□ 3.85
CDK11AQ9UQ88 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC39.11■■■■□ 3.85
CDK11AQ9UQ88 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC39.11■■■■□ 3.85
CDK11AQ9UQ88 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC39.11■■■■□ 3.85
CDK11AQ9UQ88 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC39.11■■■■□ 3.85
CDK11AQ9UQ88 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC39.1■■■■□ 3.85
CDK11AQ9UQ88 RP9P-202ENST00000450133 1212 ntBASIC39.1■■■■□ 3.85
CDK11AQ9UQ88 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC39.1■■■■□ 3.85
CDK11AQ9UQ88 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC39.09■■■■□ 3.85
CDK11AQ9UQ88 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC39.08■■■■□ 3.85
CDK11AQ9UQ88 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC39.08■■■■□ 3.85
CDK11AQ9UQ88 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
CDK11AQ9UQ88 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
CDK11AQ9UQ88 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
CDK11AQ9UQ88 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
CDK11AQ9UQ88 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC39.06■■■■□ 3.84
CDK11AQ9UQ88 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC39.05■■■■□ 3.84
CDK11AQ9UQ88 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
CDK11AQ9UQ88 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC39.05■■■■□ 3.84
CDK11AQ9UQ88 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
CDK11AQ9UQ88 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
CDK11AQ9UQ88 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC39.03■■■■□ 3.84
CDK11AQ9UQ88 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC39.03■■■■□ 3.84
CDK11AQ9UQ88 RAP2CP1-202ENST00000605179 643 ntBASIC39.03■■■■□ 3.84
CDK11AQ9UQ88 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC39.03■■■■□ 3.84
CDK11AQ9UQ88 AC093536.1-201ENST00000569153 554 ntBASIC39.02■■■■□ 3.84
CDK11AQ9UQ88 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC39.02■■■■□ 3.84
CDK11AQ9UQ88 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
CDK11AQ9UQ88 DUX4L9-201ENST00000449051 1259 ntBASIC39.01■■■■□ 3.84
CDK11AQ9UQ88 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC39.01■■■■□ 3.84
CDK11AQ9UQ88 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC39■■■■□ 3.83
CDK11AQ9UQ88 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC39■■■■□ 3.83
CDK11AQ9UQ88 PFN2-211ENST00000489155 636 ntTSL 4 BASIC38.99■■■■□ 3.83
CDK11AQ9UQ88 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC38.99■■■■□ 3.83
CDK11AQ9UQ88 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC38.99■■■■□ 3.83
CDK11AQ9UQ88 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
CDK11AQ9UQ88 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC38.98■■■■□ 3.83
CDK11AQ9UQ88 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
CDK11AQ9UQ88 MIR3960-201ENST00000583311 91 ntBASIC38.95■■■■□ 3.83
CDK11AQ9UQ88 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC38.95■■■■□ 3.83
CDK11AQ9UQ88 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC38.95■■■■□ 3.83
CDK11AQ9UQ88 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC38.95■■■■□ 3.83
CDK11AQ9UQ88 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC38.94■■■■□ 3.82
CDK11AQ9UQ88 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC38.94■■■■□ 3.82
CDK11AQ9UQ88 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC38.94■■■■□ 3.82
CDK11AQ9UQ88 AP002414.2-202ENST00000590929 1450 ntBASIC38.93■■■■□ 3.82
CDK11AQ9UQ88 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC38.93■■■■□ 3.82
CDK11AQ9UQ88 AL139393.2-201ENST00000608721 2025 ntBASIC38.92■■■■□ 3.82
CDK11AQ9UQ88 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
CDK11AQ9UQ88 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
CDK11AQ9UQ88 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC38.91■■■■□ 3.82
CDK11AQ9UQ88 AC074183.2-201ENST00000623112 922 ntBASIC38.91■■■■□ 3.82
CDK11AQ9UQ88 AL035685.1-201ENST00000636663 812 ntBASIC38.91■■■■□ 3.82
CDK11AQ9UQ88 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC38.9■■■■□ 3.82
CDK11AQ9UQ88 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC38.9■■■■□ 3.82
CDK11AQ9UQ88 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC38.9■■■■□ 3.82
CDK11AQ9UQ88 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC38.9■■■■□ 3.82
CDK11AQ9UQ88 ABCB10P3-201ENST00000561950 2166 ntBASIC38.89■■■■□ 3.82
CDK11AQ9UQ88 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC38.89■■■■□ 3.82
CDK11AQ9UQ88 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC38.89■■■■□ 3.82
CDK11AQ9UQ88 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
CDK11AQ9UQ88 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
CDK11AQ9UQ88 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC38.88■■■■□ 3.82
CDK11AQ9UQ88 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC38.88■■■■□ 3.81
CDK11AQ9UQ88 SPCS2P3-201ENST00000500401 656 ntBASIC38.88■■■■□ 3.81
CDK11AQ9UQ88 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC38.88■■■■□ 3.81
CDK11AQ9UQ88 AL451085.2-201ENST00000605085 799 ntBASIC38.88■■■■□ 3.81
CDK11AQ9UQ88 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC38.88■■■■□ 3.81
CDK11AQ9UQ88 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
CDK11AQ9UQ88 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CDK11AQ9UQ88 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC38.87■■■■□ 3.81
CDK11AQ9UQ88 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
CDK11AQ9UQ88 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC38.85■■■■□ 3.81
CDK11AQ9UQ88 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
CDK11AQ9UQ88 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC38.85■■■■□ 3.81
CDK11AQ9UQ88 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC38.84■■■■□ 3.81
CDK11AQ9UQ88 BHLHE23-202ENST00000612929 1109 ntBASIC38.84■■■■□ 3.81
CDK11AQ9UQ88 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
CDK11AQ9UQ88 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC38.84■■■■□ 3.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms