Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDL1Q9BU40 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHRDL1Q9BU40 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRDL1Q9BU40 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHRDL1Q9BU40 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDL1Q9BU40 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDL1Q9BU40 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDL1Q9BU40 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.57■□□□□ 0.72
CHRDL1Q9BU40 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.57■□□□□ 0.72
CHRDL1Q9BU40 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDL1Q9BU40 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDL1Q9BU40 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDL1Q9BU40 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRDL1Q9BU40 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHRDL1Q9BU40 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHRDL1Q9BU40 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRDL1Q9BU40 AC018358.1-201ENST00000631079 1402 ntBASIC19.54■□□□□ 0.72
CHRDL1Q9BU40 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRDL1Q9BU40 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRDL1Q9BU40 AC110285.7-201ENST00000624417 1536 ntBASIC19.54■□□□□ 0.72
CHRDL1Q9BU40 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHRDL1Q9BU40 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRDL1Q9BU40 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRDL1Q9BU40 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.53■□□□□ 0.72
CHRDL1Q9BU40 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRDL1Q9BU40 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CHRDL1Q9BU40 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRDL1Q9BU40 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CHRDL1Q9BU40 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHRDL1Q9BU40 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.51■□□□□ 0.71
CHRDL1Q9BU40 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.51■□□□□ 0.71
CHRDL1Q9BU40 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRDL1Q9BU40 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRDL1Q9BU40 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHRDL1Q9BU40 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CHRDL1Q9BU40 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRDL1Q9BU40 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHRDL1Q9BU40 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHRDL1Q9BU40 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRDL1Q9BU40 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 LINC01971-201ENST00000617888 1048 ntBASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRDL1Q9BU40 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHRDL1Q9BU40 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRDL1Q9BU40 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRDL1Q9BU40 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRDL1Q9BU40 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRDL1Q9BU40 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRDL1Q9BU40 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRDL1Q9BU40 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRDL1Q9BU40 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRDL1Q9BU40 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHRDL1Q9BU40 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRDL1Q9BU40 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRDL1Q9BU40 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHRDL1Q9BU40 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRDL1Q9BU40 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRDL1Q9BU40 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRDL1Q9BU40 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRDL1Q9BU40 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRDL1Q9BU40 ZNRF2P2-203ENST00000454624 420 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms