Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPK3BQ9BT76 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
UPK3BQ9BT76 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.22■□□□□ 0.35
UPK3BQ9BT76 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPK3BQ9BT76 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.22■□□□□ 0.35
UPK3BQ9BT76 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK3BQ9BT76 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UPK3BQ9BT76 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPK3BQ9BT76 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPK3BQ9BT76 RARRES2P2-201ENST00000394842 485 ntBASIC17.21■□□□□ 0.35
UPK3BQ9BT76 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
UPK3BQ9BT76 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK3BQ9BT76 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK3BQ9BT76 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK3BQ9BT76 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.2■□□□□ 0.34
UPK3BQ9BT76 AC060814.1-201ENST00000554326 538 ntBASIC17.2■□□□□ 0.34
UPK3BQ9BT76 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK3BQ9BT76 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.2■□□□□ 0.34
UPK3BQ9BT76 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK3BQ9BT76 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.2■□□□□ 0.34
UPK3BQ9BT76 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK3BQ9BT76 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.19■□□□□ 0.34
UPK3BQ9BT76 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UPK3BQ9BT76 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.19■□□□□ 0.34
UPK3BQ9BT76 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.18■□□□□ 0.34
UPK3BQ9BT76 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.18■□□□□ 0.34
UPK3BQ9BT76 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.18■□□□□ 0.34
UPK3BQ9BT76 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.18■□□□□ 0.34
UPK3BQ9BT76 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK3BQ9BT76 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UPK3BQ9BT76 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK3BQ9BT76 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK3BQ9BT76 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK3BQ9BT76 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK3BQ9BT76 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
UPK3BQ9BT76 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.16■□□□□ 0.34
UPK3BQ9BT76 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK3BQ9BT76 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UPK3BQ9BT76 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK3BQ9BT76 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UPK3BQ9BT76 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK3BQ9BT76 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK3BQ9BT76 AC018358.1-201ENST00000631079 1402 ntBASIC17.15■□□□□ 0.34
UPK3BQ9BT76 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK3BQ9BT76 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK3BQ9BT76 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UPK3BQ9BT76 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK3BQ9BT76 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK3BQ9BT76 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK3BQ9BT76 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UPK3BQ9BT76 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UPK3BQ9BT76 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 ABHD17AP5-201ENST00000580133 923 ntBASIC17.13■□□□□ 0.33
UPK3BQ9BT76 AC092296.2-201ENST00000589470 999 ntBASIC17.13■□□□□ 0.33
UPK3BQ9BT76 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
UPK3BQ9BT76 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK3BQ9BT76 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UPK3BQ9BT76 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK3BQ9BT76 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK3BQ9BT76 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.11■□□□□ 0.33
UPK3BQ9BT76 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK3BQ9BT76 ECEL1P2-201ENST00000461596 1295 ntBASIC17.1■□□□□ 0.33
UPK3BQ9BT76 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK3BQ9BT76 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK3BQ9BT76 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.09■□□□□ 0.33
UPK3BQ9BT76 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK3BQ9BT76 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK3BQ9BT76 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK3BQ9BT76 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK3BQ9BT76 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK3BQ9BT76 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK3BQ9BT76 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.08■□□□□ 0.32
UPK3BQ9BT76 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UPK3BQ9BT76 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK3BQ9BT76 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK3BQ9BT76 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.07■□□□□ 0.32
UPK3BQ9BT76 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK3BQ9BT76 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK3BQ9BT76 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
UPK3BQ9BT76 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
UPK3BQ9BT76 AL359258.2-201ENST00000564063 1566 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms