Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LYSMD1Q96S90 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
LYSMD1Q96S90 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
LYSMD1Q96S90 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LYSMD1Q96S90 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
LYSMD1Q96S90 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LYSMD1Q96S90 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LYSMD1Q96S90 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
LYSMD1Q96S90 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.04■■□□□ 1.6
LYSMD1Q96S90 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LYSMD1Q96S90 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LYSMD1Q96S90 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.03■■□□□ 1.6
LYSMD1Q96S90 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LYSMD1Q96S90 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
LYSMD1Q96S90 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
LYSMD1Q96S90 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LYSMD1Q96S90 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
LYSMD1Q96S90 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LYSMD1Q96S90 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
LYSMD1Q96S90 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LYSMD1Q96S90 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25■■□□□ 1.59
LYSMD1Q96S90 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25■■□□□ 1.59
LYSMD1Q96S90 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25■■□□□ 1.59
LYSMD1Q96S90 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25■■□□□ 1.59
LYSMD1Q96S90 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LYSMD1Q96S90 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
LYSMD1Q96S90 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LYSMD1Q96S90 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.99■■□□□ 1.59
LYSMD1Q96S90 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.98■■□□□ 1.59
LYSMD1Q96S90 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.98■■□□□ 1.59
LYSMD1Q96S90 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.98■■□□□ 1.59
LYSMD1Q96S90 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
LYSMD1Q96S90 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.98■■□□□ 1.59
LYSMD1Q96S90 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LYSMD1Q96S90 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LYSMD1Q96S90 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LYSMD1Q96S90 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.97■■□□□ 1.59
LYSMD1Q96S90 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.97■■□□□ 1.59
LYSMD1Q96S90 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.97■■□□□ 1.59
LYSMD1Q96S90 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
LYSMD1Q96S90 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.96■■□□□ 1.59
LYSMD1Q96S90 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
LYSMD1Q96S90 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.96■■□□□ 1.59
LYSMD1Q96S90 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LYSMD1Q96S90 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.96■■□□□ 1.59
LYSMD1Q96S90 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LYSMD1Q96S90 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
LYSMD1Q96S90 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LYSMD1Q96S90 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LYSMD1Q96S90 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LYSMD1Q96S90 AC126177.7-201ENST00000547904 679 ntBASIC24.94■■□□□ 1.58
LYSMD1Q96S90 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LYSMD1Q96S90 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
LYSMD1Q96S90 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
LYSMD1Q96S90 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
LYSMD1Q96S90 WHAMMP3-201ENST00000611636 1609 ntBASIC24.93■■□□□ 1.58
LYSMD1Q96S90 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LYSMD1Q96S90 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LYSMD1Q96S90 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.92■■□□□ 1.58
LYSMD1Q96S90 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
LYSMD1Q96S90 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LYSMD1Q96S90 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LYSMD1Q96S90 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LYSMD1Q96S90 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
LYSMD1Q96S90 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LYSMD1Q96S90 AC060814.1-201ENST00000554326 538 ntBASIC24.9■■□□□ 1.58
LYSMD1Q96S90 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
LYSMD1Q96S90 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
LYSMD1Q96S90 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LYSMD1Q96S90 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
LYSMD1Q96S90 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.58
LYSMD1Q96S90 AL359258.2-201ENST00000564063 1566 ntBASIC24.89■■□□□ 1.58
LYSMD1Q96S90 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.88■■□□□ 1.57
LYSMD1Q96S90 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LYSMD1Q96S90 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
LYSMD1Q96S90 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LYSMD1Q96S90 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.87■■□□□ 1.57
LYSMD1Q96S90 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
LYSMD1Q96S90 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.87■■□□□ 1.57
LYSMD1Q96S90 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
LYSMD1Q96S90 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LYSMD1Q96S90 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.86■■□□□ 1.57
LYSMD1Q96S90 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.86■■□□□ 1.57
LYSMD1Q96S90 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
LYSMD1Q96S90 AC022413.1-201ENST00000624602 984 ntBASIC24.85■■□□□ 1.57
LYSMD1Q96S90 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
LYSMD1Q96S90 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LYSMD1Q96S90 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
LYSMD1Q96S90 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.84■■□□□ 1.57
LYSMD1Q96S90 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.84■■□□□ 1.57
LYSMD1Q96S90 AL449106.1-201ENST00000608517 1980 ntBASIC24.84■■□□□ 1.57
LYSMD1Q96S90 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LYSMD1Q96S90 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.83■■□□□ 1.57
LYSMD1Q96S90 GPX1-201ENST00000419349 1106 ntBASIC24.83■■□□□ 1.57
LYSMD1Q96S90 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.83■■□□□ 1.57
LYSMD1Q96S90 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
LYSMD1Q96S90 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
LYSMD1Q96S90 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
LYSMD1Q96S90 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LYSMD1Q96S90 AC092296.2-201ENST00000589470 999 ntBASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms