Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCHCR1Q8TD31 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCHCR1Q8TD31 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CCHCR1Q8TD31 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCHCR1Q8TD31 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.84■■□□□ 1.73
CCHCR1Q8TD31 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.84■■□□□ 1.73
CCHCR1Q8TD31 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.83■■□□□ 1.73
CCHCR1Q8TD31 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.83■■□□□ 1.73
CCHCR1Q8TD31 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCHCR1Q8TD31 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.83■■□□□ 1.73
CCHCR1Q8TD31 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.83■■□□□ 1.73
CCHCR1Q8TD31 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.83■■□□□ 1.73
CCHCR1Q8TD31 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CCHCR1Q8TD31 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.82■■□□□ 1.72
CCHCR1Q8TD31 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCHCR1Q8TD31 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.82■■□□□ 1.72
CCHCR1Q8TD31 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.82■■□□□ 1.72
CCHCR1Q8TD31 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.82■■□□□ 1.72
CCHCR1Q8TD31 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CCHCR1Q8TD31 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCHCR1Q8TD31 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCHCR1Q8TD31 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCHCR1Q8TD31 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCHCR1Q8TD31 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCHCR1Q8TD31 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCHCR1Q8TD31 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCHCR1Q8TD31 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCHCR1Q8TD31 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.79■■□□□ 1.72
CCHCR1Q8TD31 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCHCR1Q8TD31 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CCHCR1Q8TD31 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.79■■□□□ 1.72
CCHCR1Q8TD31 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.79■■□□□ 1.72
CCHCR1Q8TD31 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCHCR1Q8TD31 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCHCR1Q8TD31 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.78■■□□□ 1.72
CCHCR1Q8TD31 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCHCR1Q8TD31 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 LINC01971-201ENST00000617888 1048 ntBASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.77■■□□□ 1.72
CCHCR1Q8TD31 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
CCHCR1Q8TD31 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
CCHCR1Q8TD31 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.76■■□□□ 1.71
CCHCR1Q8TD31 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.76■■□□□ 1.71
CCHCR1Q8TD31 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCHCR1Q8TD31 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.75■■□□□ 1.71
CCHCR1Q8TD31 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.75■■□□□ 1.71
CCHCR1Q8TD31 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCHCR1Q8TD31 AC091060.1-201ENST00000623524 1766 ntBASIC25.74■■□□□ 1.71
CCHCR1Q8TD31 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
CCHCR1Q8TD31 AL449106.1-201ENST00000608517 1980 ntBASIC25.74■■□□□ 1.71
CCHCR1Q8TD31 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCHCR1Q8TD31 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCHCR1Q8TD31 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CCHCR1Q8TD31 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCHCR1Q8TD31 MIR7108-201ENST00000614319 87 ntBASIC25.72■■□□□ 1.71
CCHCR1Q8TD31 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
CCHCR1Q8TD31 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCHCR1Q8TD31 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.7■■□□□ 1.7
CCHCR1Q8TD31 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCHCR1Q8TD31 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCHCR1Q8TD31 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCHCR1Q8TD31 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.69■■□□□ 1.7
CCHCR1Q8TD31 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCHCR1Q8TD31 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
CCHCR1Q8TD31 AC145676.1-201ENST00000514988 2004 ntBASIC25.67■■□□□ 1.7
CCHCR1Q8TD31 DUX4L11-201ENST00000611504 1267 ntBASIC25.67■■□□□ 1.7
CCHCR1Q8TD31 DUX4L12-201ENST00000614593 1267 ntBASIC25.67■■□□□ 1.7
CCHCR1Q8TD31 DUX4L14-201ENST00000621227 1267 ntBASIC25.67■■□□□ 1.7
CCHCR1Q8TD31 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CCHCR1Q8TD31 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCHCR1Q8TD31 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCHCR1Q8TD31 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.66■■□□□ 1.7
CCHCR1Q8TD31 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCHCR1Q8TD31 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCHCR1Q8TD31 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCHCR1Q8TD31 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.64■■□□□ 1.7
CCHCR1Q8TD31 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCHCR1Q8TD31 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.64■■□□□ 1.7
CCHCR1Q8TD31 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCHCR1Q8TD31 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.64■■□□□ 1.69
CCHCR1Q8TD31 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CCHCR1Q8TD31 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCHCR1Q8TD31 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
CCHCR1Q8TD31 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.63■■□□□ 1.69
CCHCR1Q8TD31 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms