Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.23■■□□□ 1.79
SCML4Q8N228 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCML4Q8N228 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCML4Q8N228 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCML4Q8N228 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCML4Q8N228 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.21■■□□□ 1.79
SCML4Q8N228 BX255925.1-201ENST00000566954 1854 ntBASIC26.21■■□□□ 1.79
SCML4Q8N228 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SCML4Q8N228 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
SCML4Q8N228 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
SCML4Q8N228 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SCML4Q8N228 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.2■■□□□ 1.78
SCML4Q8N228 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SCML4Q8N228 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
SCML4Q8N228 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCML4Q8N228 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.19■■□□□ 1.78
SCML4Q8N228 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.19■■□□□ 1.78
SCML4Q8N228 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SCML4Q8N228 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.19■■□□□ 1.78
SCML4Q8N228 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCML4Q8N228 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCML4Q8N228 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.18■■□□□ 1.78
SCML4Q8N228 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SCML4Q8N228 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCML4Q8N228 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCML4Q8N228 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.17■■□□□ 1.78
SCML4Q8N228 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.17■■□□□ 1.78
SCML4Q8N228 AC126177.7-201ENST00000547904 679 ntBASIC26.17■■□□□ 1.78
SCML4Q8N228 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCML4Q8N228 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCML4Q8N228 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.17■■□□□ 1.78
SCML4Q8N228 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.17■■□□□ 1.78
SCML4Q8N228 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SCML4Q8N228 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.16■■□□□ 1.78
SCML4Q8N228 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCML4Q8N228 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SCML4Q8N228 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCML4Q8N228 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCML4Q8N228 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCML4Q8N228 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SCML4Q8N228 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.14■■□□□ 1.78
SCML4Q8N228 AC060814.1-201ENST00000554326 538 ntBASIC26.14■■□□□ 1.78
SCML4Q8N228 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SCML4Q8N228 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCML4Q8N228 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SCML4Q8N228 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SCML4Q8N228 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.12■■□□□ 1.77
SCML4Q8N228 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SCML4Q8N228 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SCML4Q8N228 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.11■■□□□ 1.77
SCML4Q8N228 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCML4Q8N228 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.11■■□□□ 1.77
SCML4Q8N228 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SCML4Q8N228 AC022413.1-201ENST00000624602 984 ntBASIC26.1■■□□□ 1.77
SCML4Q8N228 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SCML4Q8N228 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SCML4Q8N228 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.09■■□□□ 1.77
SCML4Q8N228 GPX1-201ENST00000419349 1106 ntBASIC26.09■■□□□ 1.77
SCML4Q8N228 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.09■■□□□ 1.77
SCML4Q8N228 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.09■■□□□ 1.77
SCML4Q8N228 WHAMMP3-201ENST00000611636 1609 ntBASIC26.09■■□□□ 1.77
SCML4Q8N228 AL359258.2-201ENST00000564063 1566 ntBASIC26.08■■□□□ 1.77
SCML4Q8N228 HSD17B1P1-201ENST00000590052 955 ntBASIC26.08■■□□□ 1.77
SCML4Q8N228 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCML4Q8N228 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCML4Q8N228 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SCML4Q8N228 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.07■■□□□ 1.76
SCML4Q8N228 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SCML4Q8N228 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SCML4Q8N228 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.06■■□□□ 1.76
SCML4Q8N228 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SCML4Q8N228 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SCML4Q8N228 AC092296.2-201ENST00000589470 999 ntBASIC26.06■■□□□ 1.76
SCML4Q8N228 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.06■■□□□ 1.76
SCML4Q8N228 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SCML4Q8N228 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.05■■□□□ 1.76
SCML4Q8N228 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SCML4Q8N228 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SCML4Q8N228 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.04■■□□□ 1.76
SCML4Q8N228 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SCML4Q8N228 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SCML4Q8N228 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SCML4Q8N228 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SCML4Q8N228 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SCML4Q8N228 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SCML4Q8N228 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
SCML4Q8N228 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.01■■□□□ 1.75
SCML4Q8N228 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.01■■□□□ 1.75
SCML4Q8N228 AL157400.5-201ENST00000507624 621 ntBASIC26.01■■□□□ 1.75
SCML4Q8N228 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SCML4Q8N228 RNF126P1-201ENST00000567452 1320 ntBASIC26■■□□□ 1.75
SCML4Q8N228 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26■■□□□ 1.75
SCML4Q8N228 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SCML4Q8N228 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26■■□□□ 1.75
SCML4Q8N228 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26■■□□□ 1.75
SCML4Q8N228 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SCML4Q8N228 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SCML4Q8N228 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SCML4Q8N228 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
SCML4Q8N228 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms