Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
KRT40Q6A162 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
KRT40Q6A162 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
KRT40Q6A162 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
KRT40Q6A162 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.93■■■□□ 2.22
KRT40Q6A162 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
KRT40Q6A162 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.93■■■□□ 2.22
KRT40Q6A162 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
KRT40Q6A162 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.92■■■□□ 2.22
KRT40Q6A162 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
KRT40Q6A162 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
KRT40Q6A162 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.92■■■□□ 2.22
KRT40Q6A162 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.92■■■□□ 2.22
KRT40Q6A162 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.92■■■□□ 2.22
KRT40Q6A162 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.92■■■□□ 2.22
KRT40Q6A162 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
KRT40Q6A162 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
KRT40Q6A162 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
KRT40Q6A162 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
KRT40Q6A162 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
KRT40Q6A162 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
KRT40Q6A162 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
KRT40Q6A162 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.9■■■□□ 2.22
KRT40Q6A162 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.9■■■□□ 2.22
KRT40Q6A162 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.89■■■□□ 2.22
KRT40Q6A162 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
KRT40Q6A162 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.89■■■□□ 2.22
KRT40Q6A162 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.89■■■□□ 2.22
KRT40Q6A162 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.89■■■□□ 2.22
KRT40Q6A162 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.89■■■□□ 2.21
KRT40Q6A162 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.88■■■□□ 2.21
KRT40Q6A162 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KRT40Q6A162 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KRT40Q6A162 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
KRT40Q6A162 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
KRT40Q6A162 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KRT40Q6A162 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
KRT40Q6A162 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
KRT40Q6A162 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
KRT40Q6A162 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
KRT40Q6A162 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.85■■■□□ 2.21
KRT40Q6A162 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.85■■■□□ 2.21
KRT40Q6A162 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.84■■■□□ 2.21
KRT40Q6A162 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
KRT40Q6A162 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
KRT40Q6A162 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
KRT40Q6A162 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
KRT40Q6A162 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
KRT40Q6A162 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.83■■■□□ 2.21
KRT40Q6A162 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
KRT40Q6A162 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
KRT40Q6A162 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KRT40Q6A162 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
KRT40Q6A162 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KRT40Q6A162 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
KRT40Q6A162 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KRT40Q6A162 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KRT40Q6A162 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
KRT40Q6A162 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.81■■■□□ 2.2
KRT40Q6A162 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
KRT40Q6A162 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
KRT40Q6A162 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.8■■■□□ 2.2
KRT40Q6A162 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
KRT40Q6A162 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
KRT40Q6A162 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
KRT40Q6A162 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.78■■■□□ 2.2
KRT40Q6A162 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.78■■■□□ 2.2
KRT40Q6A162 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
KRT40Q6A162 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
KRT40Q6A162 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
KRT40Q6A162 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
KRT40Q6A162 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
KRT40Q6A162 AL449106.1-201ENST00000608517 1980 ntBASIC28.76■■■□□ 2.19
KRT40Q6A162 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.76■■■□□ 2.19
KRT40Q6A162 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
KRT40Q6A162 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.76■■■□□ 2.19
KRT40Q6A162 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.76■■■□□ 2.19
KRT40Q6A162 AC008813.1-201ENST00000536597 885 ntBASIC28.75■■■□□ 2.19
KRT40Q6A162 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
KRT40Q6A162 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
KRT40Q6A162 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
KRT40Q6A162 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.74■■■□□ 2.19
KRT40Q6A162 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
KRT40Q6A162 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.73■■■□□ 2.19
KRT40Q6A162 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
KRT40Q6A162 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
KRT40Q6A162 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
KRT40Q6A162 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
KRT40Q6A162 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
KRT40Q6A162 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.72■■■□□ 2.19
KRT40Q6A162 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KRT40Q6A162 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
KRT40Q6A162 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.71■■■□□ 2.19
KRT40Q6A162 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.71■■■□□ 2.19
KRT40Q6A162 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
KRT40Q6A162 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.7■■■□□ 2.19
KRT40Q6A162 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
KRT40Q6A162 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.7■■■□□ 2.18
KRT40Q6A162 WHAMMP3-201ENST00000611636 1609 ntBASIC28.69■■■□□ 2.18
KRT40Q6A162 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms