Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 LINC01003-201ENST00000564834 1764 ntBASIC23.22■■□□□ 1.31
HLA-DQA1Q5Y7H0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
HLA-DQA1Q5Y7H0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HLA-DQA1Q5Y7H0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.22■■□□□ 1.31
HLA-DQA1Q5Y7H0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HLA-DQA1Q5Y7H0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
HLA-DQA1Q5Y7H0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HLA-DQA1Q5Y7H0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HLA-DQA1Q5Y7H0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.21■■□□□ 1.31
HLA-DQA1Q5Y7H0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HLA-DQA1Q5Y7H0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HLA-DQA1Q5Y7H0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HLA-DQA1Q5Y7H0 BX255925.1-201ENST00000566954 1854 ntBASIC23.21■■□□□ 1.31
HLA-DQA1Q5Y7H0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
HLA-DQA1Q5Y7H0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
HLA-DQA1Q5Y7H0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HLA-DQA1Q5Y7H0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.2■■□□□ 1.3
HLA-DQA1Q5Y7H0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HLA-DQA1Q5Y7H0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HLA-DQA1Q5Y7H0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HLA-DQA1Q5Y7H0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HLA-DQA1Q5Y7H0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.19■■□□□ 1.3
HLA-DQA1Q5Y7H0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.19■■□□□ 1.3
HLA-DQA1Q5Y7H0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQA1Q5Y7H0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQA1Q5Y7H0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
HLA-DQA1Q5Y7H0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQA1Q5Y7H0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQA1Q5Y7H0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
HLA-DQA1Q5Y7H0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.18■■□□□ 1.3
HLA-DQA1Q5Y7H0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQA1Q5Y7H0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HLA-DQA1Q5Y7H0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
HLA-DQA1Q5Y7H0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HLA-DQA1Q5Y7H0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.17■■□□□ 1.3
HLA-DQA1Q5Y7H0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HLA-DQA1Q5Y7H0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HLA-DQA1Q5Y7H0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HLA-DQA1Q5Y7H0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.16■■□□□ 1.3
HLA-DQA1Q5Y7H0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQA1Q5Y7H0 AC126177.7-201ENST00000547904 679 ntBASIC23.15■■□□□ 1.3
HLA-DQA1Q5Y7H0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.15■■□□□ 1.3
HLA-DQA1Q5Y7H0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQA1Q5Y7H0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.15■■□□□ 1.3
HLA-DQA1Q5Y7H0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQA1Q5Y7H0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQA1Q5Y7H0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQA1Q5Y7H0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
HLA-DQA1Q5Y7H0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
HLA-DQA1Q5Y7H0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HLA-DQA1Q5Y7H0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
HLA-DQA1Q5Y7H0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HLA-DQA1Q5Y7H0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.13■■□□□ 1.29
HLA-DQA1Q5Y7H0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HLA-DQA1Q5Y7H0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQA1Q5Y7H0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQA1Q5Y7H0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HLA-DQA1Q5Y7H0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HLA-DQA1Q5Y7H0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HLA-DQA1Q5Y7H0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.11■■□□□ 1.29
HLA-DQA1Q5Y7H0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HLA-DQA1Q5Y7H0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HLA-DQA1Q5Y7H0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HLA-DQA1Q5Y7H0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.1■■□□□ 1.29
HLA-DQA1Q5Y7H0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.1■■□□□ 1.29
HLA-DQA1Q5Y7H0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.1■■□□□ 1.29
HLA-DQA1Q5Y7H0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HLA-DQA1Q5Y7H0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HLA-DQA1Q5Y7H0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
HLA-DQA1Q5Y7H0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HLA-DQA1Q5Y7H0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.09■■□□□ 1.29
HLA-DQA1Q5Y7H0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.09■■□□□ 1.29
HLA-DQA1Q5Y7H0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.09■■□□□ 1.29
HLA-DQA1Q5Y7H0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HLA-DQA1Q5Y7H0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.08■■□□□ 1.29
HLA-DQA1Q5Y7H0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HLA-DQA1Q5Y7H0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HLA-DQA1Q5Y7H0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HLA-DQA1Q5Y7H0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DQA1Q5Y7H0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DQA1Q5Y7H0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.07■■□□□ 1.28
HLA-DQA1Q5Y7H0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DQA1Q5Y7H0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.06■■□□□ 1.28
HLA-DQA1Q5Y7H0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DQA1Q5Y7H0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DQA1Q5Y7H0 AL359258.2-201ENST00000564063 1566 ntBASIC23.06■■□□□ 1.28
HLA-DQA1Q5Y7H0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.05■■□□□ 1.28
HLA-DQA1Q5Y7H0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DQA1Q5Y7H0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
HLA-DQA1Q5Y7H0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
HLA-DQA1Q5Y7H0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DQA1Q5Y7H0 WHAMMP3-201ENST00000611636 1609 ntBASIC23.04■■□□□ 1.28
HLA-DQA1Q5Y7H0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DQA1Q5Y7H0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DQA1Q5Y7H0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.04■■□□□ 1.28
HLA-DQA1Q5Y7H0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.04■■□□□ 1.28
HLA-DQA1Q5Y7H0 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.04■■□□□ 1.28
HLA-DQA1Q5Y7H0 AC022413.1-201ENST00000624602 984 ntBASIC23.04■■□□□ 1.28
HLA-DQA1Q5Y7H0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.04■■□□□ 1.28
HLA-DQA1Q5Y7H0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms