Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TNNI3KQ59H18 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
TNNI3KQ59H18 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.79■■■□□ 2.52
TNNI3KQ59H18 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TNNI3KQ59H18 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TNNI3KQ59H18 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
TNNI3KQ59H18 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.78■■■□□ 2.52
TNNI3KQ59H18 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
TNNI3KQ59H18 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
TNNI3KQ59H18 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
TNNI3KQ59H18 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
TNNI3KQ59H18 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TNNI3KQ59H18 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
TNNI3KQ59H18 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
TNNI3KQ59H18 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
TNNI3KQ59H18 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.76■■■□□ 2.51
TNNI3KQ59H18 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
TNNI3KQ59H18 HSD17B1P1-201ENST00000590052 955 ntBASIC30.76■■■□□ 2.51
TNNI3KQ59H18 LINC01003-201ENST00000564834 1764 ntBASIC30.76■■■□□ 2.51
TNNI3KQ59H18 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TNNI3KQ59H18 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.76■■■□□ 2.51
TNNI3KQ59H18 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
TNNI3KQ59H18 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.74■■■□□ 2.51
TNNI3KQ59H18 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.73■■■□□ 2.51
TNNI3KQ59H18 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TNNI3KQ59H18 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TNNI3KQ59H18 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
TNNI3KQ59H18 GPX1-201ENST00000419349 1106 ntBASIC30.72■■■□□ 2.51
TNNI3KQ59H18 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.72■■■□□ 2.51
TNNI3KQ59H18 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.72■■■□□ 2.51
TNNI3KQ59H18 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.72■■■□□ 2.51
TNNI3KQ59H18 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TNNI3KQ59H18 AC060814.1-201ENST00000554326 538 ntBASIC30.71■■■□□ 2.51
TNNI3KQ59H18 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TNNI3KQ59H18 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TNNI3KQ59H18 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
TNNI3KQ59H18 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
TNNI3KQ59H18 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.7■■■□□ 2.51
TNNI3KQ59H18 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TNNI3KQ59H18 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.7■■■□□ 2.51
TNNI3KQ59H18 AC022413.1-201ENST00000624602 984 ntBASIC30.7■■■□□ 2.51
TNNI3KQ59H18 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TNNI3KQ59H18 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.7■■■□□ 2.5
TNNI3KQ59H18 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
TNNI3KQ59H18 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TNNI3KQ59H18 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.68■■■□□ 2.5
TNNI3KQ59H18 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TNNI3KQ59H18 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TNNI3KQ59H18 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TNNI3KQ59H18 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TNNI3KQ59H18 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TNNI3KQ59H18 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TNNI3KQ59H18 BX255925.1-201ENST00000566954 1854 ntBASIC30.66■■■□□ 2.5
TNNI3KQ59H18 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.65■■■□□ 2.5
TNNI3KQ59H18 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.65■■■□□ 2.5
TNNI3KQ59H18 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
TNNI3KQ59H18 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
TNNI3KQ59H18 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TNNI3KQ59H18 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
TNNI3KQ59H18 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TNNI3KQ59H18 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.49
TNNI3KQ59H18 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
TNNI3KQ59H18 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.63■■■□□ 2.49
TNNI3KQ59H18 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TNNI3KQ59H18 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.63■■■□□ 2.49
TNNI3KQ59H18 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
TNNI3KQ59H18 AL359258.2-201ENST00000564063 1566 ntBASIC30.62■■■□□ 2.49
TNNI3KQ59H18 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.62■■■□□ 2.49
TNNI3KQ59H18 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TNNI3KQ59H18 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.61■■■□□ 2.49
TNNI3KQ59H18 AC126177.7-201ENST00000547904 679 ntBASIC30.61■■■□□ 2.49
TNNI3KQ59H18 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
TNNI3KQ59H18 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TNNI3KQ59H18 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.58■■■□□ 2.49
TNNI3KQ59H18 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.58■■■□□ 2.49
TNNI3KQ59H18 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
TNNI3KQ59H18 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
TNNI3KQ59H18 WHAMMP3-201ENST00000611636 1609 ntBASIC30.56■■■□□ 2.48
TNNI3KQ59H18 AL157400.5-201ENST00000507624 621 ntBASIC30.56■■■□□ 2.48
TNNI3KQ59H18 AC092296.2-201ENST00000589470 999 ntBASIC30.56■■■□□ 2.48
TNNI3KQ59H18 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TNNI3KQ59H18 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
TNNI3KQ59H18 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.55■■■□□ 2.48
TNNI3KQ59H18 RNF126P1-201ENST00000567452 1320 ntBASIC30.54■■■□□ 2.48
TNNI3KQ59H18 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.54■■■□□ 2.48
TNNI3KQ59H18 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
TNNI3KQ59H18 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
TNNI3KQ59H18 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.53■■■□□ 2.48
TNNI3KQ59H18 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TNNI3KQ59H18 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
TNNI3KQ59H18 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.52■■■□□ 2.48
TNNI3KQ59H18 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TNNI3KQ59H18 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
TNNI3KQ59H18 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TNNI3KQ59H18 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
TNNI3KQ59H18 RARRES2P2-201ENST00000394842 485 ntBASIC30.5■■■□□ 2.47
TNNI3KQ59H18 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.5■■■□□ 2.47
TNNI3KQ59H18 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TNNI3KQ59H18 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TNNI3KQ59H18 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 267.4 ms