Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 YBR284WYBR284W 2394 nt5.11□□□□□ -1.59
LSM6Q06406 YML034C-AYML034C-A 399 nt5.1□□□□□ -1.59
LSM6Q06406 YOL099CYOL099C 492 nt5.1□□□□□ -1.59
LSM6Q06406 PGI1YBR196C 1665 nt5.1□□□□□ -1.59
LSM6Q06406 SUF3tG(CCC)D 72 nt5.09□□□□□ -1.59
LSM6Q06406 CUE4YML101C 354 nt5.09□□□□□ -1.59
LSM6Q06406 INP54YOL065C 1155 nt5.09□□□□□ -1.59
LSM6Q06406 YEN1YER041W 2280 nt5.08□□□□□ -1.6
LSM6Q06406 MSG5YNL053W 1470 nt5.08□□□□□ -1.6
LSM6Q06406 BIM1YER016W 1035 nt5.08□□□□□ -1.6
LSM6Q06406 YNL295WYNL295W 1575 nt5.08□□□□□ -1.6
LSM6Q06406 RPL43AYPR043W 279 nt5.07□□□□□ -1.6
LSM6Q06406 GEF1YJR040W 2340 nt5.07□□□□□ -1.6
LSM6Q06406 CYC8YBR112C 2901 nt5.07□□□□□ -1.6
LSM6Q06406 PEX31YGR004W 1389 nt5.06□□□□□ -1.6
LSM6Q06406 TUF1YOR187W 1314 nt5.06□□□□□ -1.6
LSM6Q06406 THR1YHR025W 1074 nt5.06□□□□□ -1.6
LSM6Q06406 DYS1YHR068W 1164 nt5.06□□□□□ -1.6
LSM6Q06406 RRT14YIL127C 621 nt5.06□□□□□ -1.6
LSM6Q06406 PAC2YER007W 1557 nt5.06□□□□□ -1.6
LSM6Q06406 YPL247CYPL247C 1572 nt5.06□□□□□ -1.6
LSM6Q06406 RGD2YFL047W 2145 nt5.06□□□□□ -1.6
LSM6Q06406 ACS1YAL054C 2142 nt5.06□□□□□ -1.6
LSM6Q06406 FRE5YOR384W 2085 nt5.06□□□□□ -1.6
LSM6Q06406 ARG81YML099C 2643 nt5.05□□□□□ -1.6
LSM6Q06406 GCN3YKR026C 918 nt5.05□□□□□ -1.6
LSM6Q06406 ADH5YBR145W 1056 nt5.05□□□□□ -1.6
LSM6Q06406 YPR204WYPR204W 3099 nt5.04□□□□□ -1.6
LSM6Q06406 POP1YNL221C 2628 nt5.04□□□□□ -1.6
LSM6Q06406 snR82snR82 268 nt5.04□□□□□ -1.6
LSM6Q06406 PPM1YDR435C 987 nt5.04□□□□□ -1.6
LSM6Q06406 HIS1YER055C 894 nt5.04□□□□□ -1.6
LSM6Q06406 CIS3YJL158C 684 nt5.04□□□□□ -1.6
LSM6Q06406 EFT2YDR385W 2529 nt5.04□□□□□ -1.6
LSM6Q06406 EFT1YOR133W 2529 nt5.04□□□□□ -1.6
LSM6Q06406 ERO1YML130C 1692 nt5.04□□□□□ -1.6
LSM6Q06406 SES1YDR023W 1389 nt5.04□□□□□ -1.6
LSM6Q06406 IMA5YJL216C 1746 nt5.03□□□□□ -1.6
LSM6Q06406 CYC3YAL039C 810 nt5.03□□□□□ -1.6
LSM6Q06406 YPT10YBR264C 600 nt5.03□□□□□ -1.6
LSM6Q06406 LAG2YOL025W 1983 nt5.02□□□□□ -1.61
LSM6Q06406 SUF5tG(CCC)O 72 nt5.02□□□□□ -1.61
LSM6Q06406 YGR127WYGR127W 939 nt5.02□□□□□ -1.61
LSM6Q06406 YKR032WYKR032W 315 nt5.02□□□□□ -1.61
LSM6Q06406 ERG27YLR100W 1044 nt5.02□□□□□ -1.61
LSM6Q06406 TPO3YPR156C 1869 nt5.01□□□□□ -1.61
LSM6Q06406 RRP43YCR035C 1185 nt5.01□□□□□ -1.61
LSM6Q06406 YFL013W-AYFL013W-A 804 nt5.01□□□□□ -1.61
LSM6Q06406 YJR107WYJR107W 987 nt5.01□□□□□ -1.61
LSM6Q06406 PEX13YLR191W 1161 nt5.01□□□□□ -1.61
LSM6Q06406 COX5AYNL052W 462 nt5.01□□□□□ -1.61
LSM6Q06406 NAF1YNL124W 1479 nt5□□□□□ -1.61
LSM6Q06406 KTR5YNL029C 1569 nt5□□□□□ -1.61
LSM6Q06406 FLX1YIL134W 936 nt5□□□□□ -1.61
LSM6Q06406 YMR206WYMR206W 942 nt5□□□□□ -1.61
LSM6Q06406 RSA4YCR072C 1548 nt5□□□□□ -1.61
LSM6Q06406 RGD1YBR260C 2001 nt5□□□□□ -1.61
LSM6Q06406 SLX5YDL013W 1860 nt5□□□□□ -1.61
LSM6Q06406 BRN1YBL097W 2265 nt4.99□□□□□ -1.61
LSM6Q06406 CTA1YDR256C 1548 nt4.99□□□□□ -1.61
LSM6Q06406 CSC1YLR241W 2349 nt4.99□□□□□ -1.61
LSM6Q06406 IGD1YFR017C 588 nt4.99□□□□□ -1.61
LSM6Q06406 YML6YML025C 861 nt4.99□□□□□ -1.61
LSM6Q06406 LSP1YPL004C 1026 nt4.99□□□□□ -1.61
LSM6Q06406 HXK2YGL253W 1461 nt4.99□□□□□ -1.61
LSM6Q06406 THI4YGR144W 981 nt4.98□□□□□ -1.61
LSM6Q06406 ICS3YJL077C 396 nt4.98□□□□□ -1.61
LSM6Q06406 NCA3YJL116C 1014 nt4.98□□□□□ -1.61
LSM6Q06406 DSC3YOR223W 879 nt4.98□□□□□ -1.61
LSM6Q06406 SPS1YDR523C 1473 nt4.97□□□□□ -1.61
LSM6Q06406 PET494YNR045W 1470 nt4.97□□□□□ -1.61
LSM6Q06406 HPT1YDR399W 666 nt4.97□□□□□ -1.61
LSM6Q06406 OAC1YKL120W 975 nt4.97□□□□□ -1.61
LSM6Q06406 DUS4YLR405W 1104 nt4.97□□□□□ -1.61
LSM6Q06406 ATG22YCL038C 1587 nt4.96□□□□□ -1.62
LSM6Q06406 YEL008WYEL008W 381 nt4.96□□□□□ -1.62
LSM6Q06406 VHT1YGR065C 1782 nt4.96□□□□□ -1.62
LSM6Q06406 YPR084WYPR084W 1371 nt4.95□□□□□ -1.62
LSM6Q06406 YDR415CYDR415C 1125 nt4.95□□□□□ -1.62
LSM6Q06406 PET117YER058W 324 nt4.95□□□□□ -1.62
LSM6Q06406 SER2YGR208W 930 nt4.95□□□□□ -1.62
LSM6Q06406 CCP1YKR066C 1086 nt4.95□□□□□ -1.62
LSM6Q06406 ATP23YNR020C 813 nt4.95□□□□□ -1.62
LSM6Q06406 RMD9YGL107C 1941 nt4.95□□□□□ -1.62
LSM6Q06406 KEL1YHR158C 3495 nt4.95□□□□□ -1.62
LSM6Q06406 NMT1YLR195C 1368 nt4.94□□□□□ -1.62
LSM6Q06406 YML133CYML133C 4125 nt4.94□□□□□ -1.62
LSM6Q06406 PSA1YDL055C 1086 nt4.94□□□□□ -1.62
LSM6Q06406 COX9YDL067C 180 nt4.94□□□□□ -1.62
LSM6Q06406 TRS31YDR472W 852 nt4.94□□□□□ -1.62
LSM6Q06406 TOS6YNL300W 309 nt4.94□□□□□ -1.62
LSM6Q06406 SDH8YBR269C 417 nt4.94□□□□□ -1.62
LSM6Q06406 PXL1YKR090W 2121 nt4.94□□□□□ -1.62
LSM6Q06406 PMT3YOR321W 2262 nt4.93□□□□□ -1.62
LSM6Q06406 RPS6AYPL090C 711 nt4.93□□□□□ -1.62
LSM6Q06406 RPS6BYBR181C 711 nt4.93□□□□□ -1.62
LSM6Q06406 YDR387CYDR387C 1668 nt4.92□□□□□ -1.62
LSM6Q06406 GPA1YHR005C 1419 nt4.92□□□□□ -1.62
LSM6Q06406 YJL213WYJL213W 996 nt4.92□□□□□ -1.62
LSM6Q06406 CCW12YLR110C 402 nt4.92□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 10.9 ms