Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 AC110285.7-201ENST00000624417 1536 ntBASIC23.68■■□□□ 1.38
WNT3P56703 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
WNT3P56703 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3P56703 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.67■■□□□ 1.38
WNT3P56703 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3P56703 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3P56703 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.67■■□□□ 1.38
WNT3P56703 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3P56703 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
WNT3P56703 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3P56703 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3P56703 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
WNT3P56703 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.66■■□□□ 1.38
WNT3P56703 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
WNT3P56703 HLA-V-202ENST00000446817 847 ntBASIC23.66■■□□□ 1.38
WNT3P56703 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
WNT3P56703 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.65■■□□□ 1.38
WNT3P56703 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.64■■□□□ 1.38
WNT3P56703 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
WNT3P56703 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
WNT3P56703 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
WNT3P56703 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
WNT3P56703 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
WNT3P56703 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
WNT3P56703 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
WNT3P56703 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
WNT3P56703 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.62■■□□□ 1.37
WNT3P56703 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
WNT3P56703 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.62■■□□□ 1.37
WNT3P56703 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.61■■□□□ 1.37
WNT3P56703 AC091060.1-201ENST00000623524 1766 ntBASIC23.61■■□□□ 1.37
WNT3P56703 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
WNT3P56703 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
WNT3P56703 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.61■■□□□ 1.37
WNT3P56703 AL449106.1-201ENST00000608517 1980 ntBASIC23.6■■□□□ 1.37
WNT3P56703 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3P56703 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
WNT3P56703 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
WNT3P56703 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
WNT3P56703 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
WNT3P56703 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.58■■□□□ 1.37
WNT3P56703 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
WNT3P56703 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.58■■□□□ 1.37
WNT3P56703 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.57■■□□□ 1.36
WNT3P56703 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.57■■□□□ 1.36
WNT3P56703 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
WNT3P56703 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.55■■□□□ 1.36
WNT3P56703 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
WNT3P56703 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.55■■□□□ 1.36
WNT3P56703 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
WNT3P56703 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.55■■□□□ 1.36
WNT3P56703 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
WNT3P56703 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
WNT3P56703 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.54■■□□□ 1.36
WNT3P56703 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
WNT3P56703 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
WNT3P56703 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.54■■□□□ 1.36
WNT3P56703 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
WNT3P56703 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.53■■□□□ 1.36
WNT3P56703 AP004609.3-201ENST00000610705 1884 ntBASIC23.52■■□□□ 1.36
WNT3P56703 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.51■■□□□ 1.35
WNT3P56703 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.51■■□□□ 1.35
WNT3P56703 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
WNT3P56703 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
WNT3P56703 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.5■■□□□ 1.35
WNT3P56703 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
WNT3P56703 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
WNT3P56703 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.49■■□□□ 1.35
WNT3P56703 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
WNT3P56703 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
WNT3P56703 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
WNT3P56703 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.48■■□□□ 1.35
WNT3P56703 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
WNT3P56703 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
WNT3P56703 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
WNT3P56703 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.47■■□□□ 1.35
WNT3P56703 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
WNT3P56703 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.47■■□□□ 1.35
WNT3P56703 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
WNT3P56703 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
WNT3P56703 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
WNT3P56703 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
WNT3P56703 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.45■■□□□ 1.35
WNT3P56703 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
WNT3P56703 WHAMMP3-201ENST00000611636 1609 ntBASIC23.45■■□□□ 1.34
WNT3P56703 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.45■■□□□ 1.34
WNT3P56703 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
WNT3P56703 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
WNT3P56703 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
WNT3P56703 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.44■■□□□ 1.34
WNT3P56703 AC145676.1-201ENST00000514988 2004 ntBASIC23.44■■□□□ 1.34
WNT3P56703 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.44■■□□□ 1.34
WNT3P56703 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
WNT3P56703 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
WNT3P56703 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
WNT3P56703 AC142472.1-201ENST00000612013 1741 ntBASIC23.43■■□□□ 1.34
WNT3P56703 DUX4L11-201ENST00000611504 1267 ntBASIC23.43■■□□□ 1.34
WNT3P56703 DUX4L12-201ENST00000614593 1267 ntBASIC23.43■■□□□ 1.34
WNT3P56703 DUX4L14-201ENST00000621227 1267 ntBASIC23.43■■□□□ 1.34
WNT3P56703 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms