Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.44■□□□□ 0.86
THBS3P49746 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THBS3P49746 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
THBS3P49746 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.44■□□□□ 0.86
THBS3P49746 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THBS3P49746 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
THBS3P49746 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
THBS3P49746 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.43■□□□□ 0.86
THBS3P49746 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THBS3P49746 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
THBS3P49746 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
THBS3P49746 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THBS3P49746 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
THBS3P49746 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
THBS3P49746 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.42■□□□□ 0.86
THBS3P49746 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
THBS3P49746 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THBS3P49746 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
THBS3P49746 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THBS3P49746 AC135731.1-201ENST00000569415 2548 ntBASIC20.42■□□□□ 0.86
THBS3P49746 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THBS3P49746 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
THBS3P49746 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
THBS3P49746 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.4■□□□□ 0.86
THBS3P49746 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.4■□□□□ 0.86
THBS3P49746 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.4■□□□□ 0.86
THBS3P49746 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
THBS3P49746 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.4■□□□□ 0.86
THBS3P49746 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
THBS3P49746 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
THBS3P49746 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
THBS3P49746 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
THBS3P49746 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.39■□□□□ 0.85
THBS3P49746 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
THBS3P49746 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
THBS3P49746 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
THBS3P49746 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
THBS3P49746 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THBS3P49746 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.38■□□□□ 0.85
THBS3P49746 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THBS3P49746 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.38■□□□□ 0.85
THBS3P49746 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.38■□□□□ 0.85
THBS3P49746 AC110285.7-201ENST00000624417 1536 ntBASIC20.37■□□□□ 0.85
THBS3P49746 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.37■□□□□ 0.85
THBS3P49746 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
THBS3P49746 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.37■□□□□ 0.85
THBS3P49746 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
THBS3P49746 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS3P49746 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS3P49746 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.37■□□□□ 0.85
THBS3P49746 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
THBS3P49746 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THBS3P49746 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THBS3P49746 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
THBS3P49746 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
THBS3P49746 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.35■□□□□ 0.85
THBS3P49746 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.35■□□□□ 0.85
THBS3P49746 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
THBS3P49746 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.35■□□□□ 0.85
THBS3P49746 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THBS3P49746 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS3P49746 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.34■□□□□ 0.85
THBS3P49746 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.33■□□□□ 0.85
THBS3P49746 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
THBS3P49746 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
THBS3P49746 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
THBS3P49746 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
THBS3P49746 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THBS3P49746 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THBS3P49746 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
THBS3P49746 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.32■□□□□ 0.84
THBS3P49746 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.32■□□□□ 0.84
THBS3P49746 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THBS3P49746 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.32■□□□□ 0.84
THBS3P49746 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
THBS3P49746 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.31■□□□□ 0.84
THBS3P49746 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
THBS3P49746 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
THBS3P49746 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
THBS3P49746 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
THBS3P49746 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
THBS3P49746 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
THBS3P49746 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
THBS3P49746 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.29■□□□□ 0.84
THBS3P49746 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.29■□□□□ 0.84
THBS3P49746 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THBS3P49746 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.28■□□□□ 0.84
THBS3P49746 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
THBS3P49746 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
THBS3P49746 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.28■□□□□ 0.84
THBS3P49746 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.28■□□□□ 0.84
THBS3P49746 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
THBS3P49746 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS3P49746 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THBS3P49746 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
THBS3P49746 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.27■□□□□ 0.84
THBS3P49746 LINC01971-201ENST00000617888 1048 ntBASIC20.27■□□□□ 0.84
THBS3P49746 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.27■□□□□ 0.84
THBS3P49746 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
THBS3P49746 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms