Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HTR3AP46098 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
HTR3AP46098 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HTR3AP46098 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.89■■□□□ 1.25
HTR3AP46098 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.89■■□□□ 1.25
HTR3AP46098 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.89■■□□□ 1.25
HTR3AP46098 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HTR3AP46098 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HTR3AP46098 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HTR3AP46098 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HTR3AP46098 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
HTR3AP46098 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
HTR3AP46098 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HTR3AP46098 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
HTR3AP46098 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HTR3AP46098 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HTR3AP46098 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HTR3AP46098 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HTR3AP46098 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.86■■□□□ 1.25
HTR3AP46098 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HTR3AP46098 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
HTR3AP46098 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.85■■□□□ 1.25
HTR3AP46098 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.85■■□□□ 1.25
HTR3AP46098 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HTR3AP46098 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.84■■□□□ 1.25
HTR3AP46098 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HTR3AP46098 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HTR3AP46098 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
HTR3AP46098 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
HTR3AP46098 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
HTR3AP46098 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.83■■□□□ 1.25
HTR3AP46098 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.83■■□□□ 1.25
HTR3AP46098 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.83■■□□□ 1.25
HTR3AP46098 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
HTR3AP46098 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
HTR3AP46098 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
HTR3AP46098 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.82■■□□□ 1.24
HTR3AP46098 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
HTR3AP46098 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
HTR3AP46098 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
HTR3AP46098 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HTR3AP46098 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.81■■□□□ 1.24
HTR3AP46098 AC008813.1-201ENST00000536597 885 ntBASIC22.81■■□□□ 1.24
HTR3AP46098 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.81■■□□□ 1.24
HTR3AP46098 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HTR3AP46098 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HTR3AP46098 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HTR3AP46098 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HTR3AP46098 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HTR3AP46098 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
HTR3AP46098 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HTR3AP46098 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HTR3AP46098 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HTR3AP46098 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.79■■□□□ 1.24
HTR3AP46098 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
HTR3AP46098 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
HTR3AP46098 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HTR3AP46098 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
HTR3AP46098 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.78■■□□□ 1.24
HTR3AP46098 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HTR3AP46098 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.78■■□□□ 1.24
HTR3AP46098 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HTR3AP46098 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.77■■□□□ 1.24
HTR3AP46098 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HTR3AP46098 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HTR3AP46098 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
HTR3AP46098 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HTR3AP46098 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HTR3AP46098 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
HTR3AP46098 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HTR3AP46098 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
HTR3AP46098 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HTR3AP46098 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HTR3AP46098 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HTR3AP46098 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HTR3AP46098 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
HTR3AP46098 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
HTR3AP46098 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HTR3AP46098 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
HTR3AP46098 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.73■■□□□ 1.23
HTR3AP46098 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HTR3AP46098 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HTR3AP46098 MIR7108-201ENST00000614319 87 ntBASIC22.73■■□□□ 1.23
HTR3AP46098 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HTR3AP46098 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.73■■□□□ 1.23
HTR3AP46098 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
HTR3AP46098 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.73■■□□□ 1.23
HTR3AP46098 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HTR3AP46098 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
HTR3AP46098 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
HTR3AP46098 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
HTR3AP46098 CR559946.2-201ENST00000623684 991 ntBASIC22.72■■□□□ 1.23
HTR3AP46098 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.72■■□□□ 1.23
HTR3AP46098 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.72■■□□□ 1.23
HTR3AP46098 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HTR3AP46098 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HTR3AP46098 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
HTR3AP46098 MIR3648-2-201ENST00000581792 180 ntBASIC22.71■■□□□ 1.23
HTR3AP46098 MIR3648-1-201ENST00000615959 180 ntBASIC22.71■■□□□ 1.23
HTR3AP46098 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms