Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 URH1YDR400W 1023 nt7.68□□□□□ -1.18
MSH1P25846 MTR3YGR158C 753 nt7.68□□□□□ -1.18
MSH1P25846 TDH1YJL052W 999 nt7.68□□□□□ -1.18
MSH1P25846 ADH6YMR318C 1083 nt7.68□□□□□ -1.18
MSH1P25846 SNT309YPR101W 528 nt7.68□□□□□ -1.18
MSH1P25846 UTR5YEL035C 501 nt7.67□□□□□ -1.18
MSH1P25846 ERG24YNL280C 1317 nt7.67□□□□□ -1.18
MSH1P25846 GPH1YPR160W 2709 nt7.67□□□□□ -1.18
MSH1P25846 ATP2YJR121W 1536 nt7.67□□□□□ -1.18
MSH1P25846 RDR1YOR380W 1641 nt7.67□□□□□ -1.18
MSH1P25846 ECM38YLR299W 1983 nt7.66□□□□□ -1.18
MSH1P25846 ELP4YPL101W 1371 nt7.66□□□□□ -1.18
MSH1P25846 STE3YKL178C 1413 nt7.66□□□□□ -1.18
MSH1P25846 MCH2YKL221W 1422 nt7.66□□□□□ -1.18
MSH1P25846 CEM1YER061C 1329 nt7.65□□□□□ -1.18
MSH1P25846 YPL277CYPL277C 1464 nt7.65□□□□□ -1.18
MSH1P25846 YBR241CYBR241C 1467 nt7.65□□□□□ -1.18
MSH1P25846 YNL295WYNL295W 1575 nt7.64□□□□□ -1.19
MSH1P25846 OPI1YHL020C 1215 nt7.64□□□□□ -1.19
MSH1P25846 CDC7YDL017W 1524 nt7.63□□□□□ -1.19
MSH1P25846 BDS1YOL164W 1941 nt7.63□□□□□ -1.19
MSH1P25846 CLN1YMR199W 1641 nt7.63□□□□□ -1.19
MSH1P25846 tL(UAA)B1tL(UAA)B1 84 nt7.62□□□□□ -1.19
MSH1P25846 tL(UAA)B2tL(UAA)B2 84 nt7.62□□□□□ -1.19
MSH1P25846 tL(UAA)DtL(UAA)D 84 nt7.62□□□□□ -1.19
MSH1P25846 SUP51tL(UAA)J 84 nt7.62□□□□□ -1.19
MSH1P25846 tL(UAA)KtL(UAA)K 84 nt7.62□□□□□ -1.19
MSH1P25846 tL(UAA)LtL(UAA)L 84 nt7.62□□□□□ -1.19
MSH1P25846 tL(UAA)NtL(UAA)N 84 nt7.62□□□□□ -1.19
MSH1P25846 SGV1YPR161C 1974 nt7.62□□□□□ -1.19
MSH1P25846 AMN1YBR158W 1650 nt7.61□□□□□ -1.19
MSH1P25846 CCT3YJL014W 1605 nt7.61□□□□□ -1.19
MSH1P25846 OPI11YPR044C 354 nt7.61□□□□□ -1.19
MSH1P25846 UBP13YBL067C 2244 nt7.61□□□□□ -1.19
MSH1P25846 MAK32YCR019W 1092 nt7.6□□□□□ -1.19
MSH1P25846 HSP12YFL014W 330 nt7.6□□□□□ -1.19
MSH1P25846 CTF8YHR191C 402 nt7.6□□□□□ -1.19
MSH1P25846 YAL045CYAL045C 309 nt7.6□□□□□ -1.19
MSH1P25846 YOR268CYOR268C 399 nt7.6□□□□□ -1.19
MSH1P25846 ADE1YAR015W 921 nt7.59□□□□□ -1.19
MSH1P25846 YNL165WYNL165W 1221 nt7.59□□□□□ -1.19
MSH1P25846 NUP53YMR153W 1428 nt7.59□□□□□ -1.19
MSH1P25846 ERG12YMR208W 1332 nt7.58□□□□□ -1.2
MSH1P25846 EMP65YER140W 1671 nt7.58□□□□□ -1.2
MSH1P25846 PGI1YBR196C 1665 nt7.58□□□□□ -1.2
MSH1P25846 EDC2YER035W 438 nt7.58□□□□□ -1.2
MSH1P25846 ATG17YLR423C 1254 nt7.58□□□□□ -1.2
MSH1P25846 TOS1YBR162C 1368 nt7.58□□□□□ -1.2
MSH1P25846 IRC5YFR038W 2562 nt7.58□□□□□ -1.2
MSH1P25846 MRPL28YDR462W 444 nt7.57□□□□□ -1.2
MSH1P25846 YDR476CYDR476C 675 nt7.57□□□□□ -1.2
MSH1P25846 YIL168WYIL168W 384 nt7.57□□□□□ -1.2
MSH1P25846 SUN4YNL066W 1263 nt7.57□□□□□ -1.2
MSH1P25846 INP54YOL065C 1155 nt7.57□□□□□ -1.2
MSH1P25846 YOR300WYOR300W 309 nt7.57□□□□□ -1.2
MSH1P25846 TAH11YJR046W 1815 nt7.57□□□□□ -1.2
MSH1P25846 BDF2YDL070W 1917 nt7.56□□□□□ -1.2
MSH1P25846 FUS3YBL016W 1062 nt7.56□□□□□ -1.2
MSH1P25846 REC114YMR133W 1287 nt7.56□□□□□ -1.2
MSH1P25846 PHO85YPL031C 918 nt7.56□□□□□ -1.2
MSH1P25846 VMA2YBR127C 1554 nt7.55□□□□□ -1.2
MSH1P25846 FPR2YDR519W 408 nt7.55□□□□□ -1.2
MSH1P25846 GET2YER083C 858 nt7.55□□□□□ -1.2
MSH1P25846 YCR061WYCR061W 1896 nt7.55□□□□□ -1.2
MSH1P25846 HBN1YCL026C-B 582 nt7.54□□□□□ -1.2
MSH1P25846 TDP1YBR223C 1635 nt7.53□□□□□ -1.2
MSH1P25846 SPS1YDR523C 1473 nt7.53□□□□□ -1.2
MSH1P25846 PET494YNR045W 1470 nt7.53□□□□□ -1.2
MSH1P25846 PSP2YML017W 1782 nt7.52□□□□□ -1.21
MSH1P25846 RRP43YCR035C 1185 nt7.52□□□□□ -1.21
MSH1P25846 AI5_BETAQ0075 1065 nt7.52□□□□□ -1.21
MSH1P25846 YMR074CYMR074C 438 nt7.52□□□□□ -1.21
MSH1P25846 GLN3YER040W 2193 nt7.52□□□□□ -1.21
MSH1P25846 COX16YJL003W 357 nt7.51□□□□□ -1.21
MSH1P25846 CTA1YDR256C 1548 nt7.51□□□□□ -1.21
MSH1P25846 TOS2YGR221C 1869 nt7.51□□□□□ -1.21
MSH1P25846 BNS1YGR230W 414 nt7.5□□□□□ -1.21
MSH1P25846 YNR014WYNR014W 639 nt7.5□□□□□ -1.21
MSH1P25846 GTT3YEL017W 1014 nt7.49□□□□□ -1.21
MSH1P25846 ERG27YLR100W 1044 nt7.49□□□□□ -1.21
MSH1P25846 CPT1YNL130C 1182 nt7.49□□□□□ -1.21
MSH1P25846 DYS1YHR068W 1164 nt7.48□□□□□ -1.21
MSH1P25846 YHC3YJL059W 1227 nt7.48□□□□□ -1.21
MSH1P25846 OPI8YKR035C 642 nt7.48□□□□□ -1.21
MSH1P25846 KAE1YKR038C 1161 nt7.48□□□□□ -1.21
MSH1P25846 RPL5YPL131W 894 nt7.48□□□□□ -1.21
MSH1P25846 MIX17YMR002W 471 nt7.47□□□□□ -1.21
MSH1P25846 YPR127WYPR127W 1038 nt7.47□□□□□ -1.21
MSH1P25846 YPT10YBR264C 600 nt7.47□□□□□ -1.21
MSH1P25846 HOG1YLR113W 1308 nt7.47□□□□□ -1.21
MSH1P25846 SPR1YOR190W 1338 nt7.47□□□□□ -1.21
MSH1P25846 PSA1YDL055C 1086 nt7.46□□□□□ -1.22
MSH1P25846 DLD1YDL174C 1764 nt7.46□□□□□ -1.22
MSH1P25846 THR1YHR025W 1074 nt7.45□□□□□ -1.22
MSH1P25846 RDN5-2RDN5-2 119 nt7.45□□□□□ -1.22
MSH1P25846 RDN5-3RDN5-3 119 nt7.45□□□□□ -1.22
MSH1P25846 RDN5-4RDN5-4 119 nt7.45□□□□□ -1.22
MSH1P25846 RDN5-5RDN5-5 119 nt7.45□□□□□ -1.22
MSH1P25846 SUR7YML052W 909 nt7.45□□□□□ -1.22
MSH1P25846 YOL099CYOL099C 492 nt7.45□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms