Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh3P10287 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh3P10287 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh3P10287 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh3P10287 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh3P10287 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh3P10287 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Cdh3P10287 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Cdh3P10287 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdh3P10287 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh3P10287 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Cdh3P10287 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh3P10287 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.76■□□□□ 0.91
Cdh3P10287 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cdh3P10287 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh3P10287 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh3P10287 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.76■□□□□ 0.91
Cdh3P10287 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.75■□□□□ 0.91
Cdh3P10287 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh3P10287 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh3P10287 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh3P10287 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh3P10287 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh3P10287 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Cdh3P10287 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh3P10287 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh3P10287 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh3P10287 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh3P10287 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh3P10287 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh3P10287 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cdh3P10287 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh3P10287 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh3P10287 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdh3P10287 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh3P10287 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh3P10287 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cdh3P10287 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh3P10287 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Cdh3P10287 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh3P10287 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh3P10287 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh3P10287 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh3P10287 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh3P10287 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.71■□□□□ 0.91
Cdh3P10287 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh3P10287 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh3P10287 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh3P10287 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh3P10287 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh3P10287 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdh3P10287 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh3P10287 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.69■□□□□ 0.9
Cdh3P10287 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh3P10287 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cdh3P10287 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh3P10287 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh3P10287 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cdh3P10287 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cdh3P10287 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.67■□□□□ 0.9
Cdh3P10287 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdh3P10287 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh3P10287 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdh3P10287 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh3P10287 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh3P10287 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh3P10287 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh3P10287 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh3P10287 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh3P10287 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh3P10287 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh3P10287 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh3P10287 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cdh3P10287 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh3P10287 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh3P10287 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh3P10287 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Cdh3P10287 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdh3P10287 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cdh3P10287 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh3P10287 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh3P10287 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh3P10287 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh3P10287 Particl-201ENSMUST00000205370 1560 ntBASIC20.63■□□□□ 0.89
Cdh3P10287 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh3P10287 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh3P10287 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.62■□□□□ 0.89
Cdh3P10287 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh3P10287 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh3P10287 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.61■□□□□ 0.89
Cdh3P10287 Gm7432-201ENSMUST00000210343 879 ntBASIC20.61■□□□□ 0.89
Cdh3P10287 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh3P10287 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh3P10287 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cdh3P10287 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
Cdh3P10287 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh3P10287 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh3P10287 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh3P10287 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh3P10287 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms