Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCATP04180 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCATP04180 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCATP04180 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCATP04180 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LCATP04180 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCATP04180 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.71■■□□□ 1.07
LCATP04180 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
LCATP04180 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.71■■□□□ 1.07
LCATP04180 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.7■■□□□ 1.06
LCATP04180 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LCATP04180 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LCATP04180 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.69■■□□□ 1.06
LCATP04180 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.69■■□□□ 1.06
LCATP04180 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.68■■□□□ 1.06
LCATP04180 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.68■■□□□ 1.06
LCATP04180 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCATP04180 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCATP04180 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LCATP04180 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.68■■□□□ 1.06
LCATP04180 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.68■■□□□ 1.06
LCATP04180 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.68■■□□□ 1.06
LCATP04180 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LCATP04180 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LCATP04180 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.67■■□□□ 1.06
LCATP04180 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.67■■□□□ 1.06
LCATP04180 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LCATP04180 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LCATP04180 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LCATP04180 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LCATP04180 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCATP04180 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.66■■□□□ 1.06
LCATP04180 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.66■■□□□ 1.06
LCATP04180 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.66■■□□□ 1.06
LCATP04180 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCATP04180 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCATP04180 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.65■■□□□ 1.06
LCATP04180 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCATP04180 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCATP04180 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LCATP04180 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LCATP04180 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LCATP04180 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LCATP04180 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
LCATP04180 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.64■■□□□ 1.05
LCATP04180 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.64■■□□□ 1.05
LCATP04180 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
LCATP04180 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCATP04180 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCATP04180 AC008813.1-201ENST00000536597 885 ntBASIC21.63■■□□□ 1.05
LCATP04180 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
LCATP04180 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LCATP04180 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCATP04180 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
LCATP04180 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCATP04180 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCATP04180 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCATP04180 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
LCATP04180 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.62■■□□□ 1.05
LCATP04180 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
LCATP04180 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCATP04180 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.61■■□□□ 1.05
LCATP04180 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCATP04180 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCATP04180 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
LCATP04180 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCATP04180 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.6■■□□□ 1.05
LCATP04180 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LCATP04180 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LCATP04180 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LCATP04180 CR559946.2-201ENST00000623684 991 ntBASIC21.59■■□□□ 1.05
LCATP04180 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LCATP04180 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LCATP04180 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
LCATP04180 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
LCATP04180 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
LCATP04180 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.58■■□□□ 1.05
LCATP04180 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LCATP04180 AL449106.1-201ENST00000608517 1980 ntBASIC21.57■■□□□ 1.04
LCATP04180 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LCATP04180 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
LCATP04180 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LCATP04180 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.57■■□□□ 1.04
LCATP04180 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LCATP04180 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.56■■□□□ 1.04
LCATP04180 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LCATP04180 WHAMMP3-201ENST00000611636 1609 ntBASIC21.56■■□□□ 1.04
LCATP04180 MIR3648-2-201ENST00000581792 180 ntBASIC21.56■■□□□ 1.04
LCATP04180 MIR3648-1-201ENST00000615959 180 ntBASIC21.56■■□□□ 1.04
LCATP04180 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.56■■□□□ 1.04
LCATP04180 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LCATP04180 MIR7108-201ENST00000614319 87 ntBASIC21.55■■□□□ 1.04
LCATP04180 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LCATP04180 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LCATP04180 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LCATP04180 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.54■■□□□ 1.04
LCATP04180 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.54■■□□□ 1.04
LCATP04180 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LCATP04180 MIR219A2-201ENST00000608502 1504 ntBASIC21.54■■□□□ 1.04
LCATP04180 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms