Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TGFAP01135 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TGFAP01135 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TGFAP01135 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.64■□□□□ 0.89
TGFAP01135 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.63■□□□□ 0.89
TGFAP01135 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.63■□□□□ 0.89
TGFAP01135 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TGFAP01135 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TGFAP01135 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
TGFAP01135 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TGFAP01135 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TGFAP01135 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TGFAP01135 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TGFAP01135 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.62■□□□□ 0.89
TGFAP01135 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
TGFAP01135 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TGFAP01135 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TGFAP01135 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
TGFAP01135 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.61■□□□□ 0.89
TGFAP01135 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.61■□□□□ 0.89
TGFAP01135 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TGFAP01135 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TGFAP01135 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TGFAP01135 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.6■□□□□ 0.89
TGFAP01135 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TGFAP01135 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TGFAP01135 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TGFAP01135 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TGFAP01135 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TGFAP01135 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TGFAP01135 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.59■□□□□ 0.89
TGFAP01135 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TGFAP01135 AC026202.3-201ENST00000600805 1127 ntBASIC20.59■□□□□ 0.89
TGFAP01135 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
TGFAP01135 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.59■□□□□ 0.89
TGFAP01135 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.59■□□□□ 0.89
TGFAP01135 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TGFAP01135 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TGFAP01135 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TGFAP01135 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TGFAP01135 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TGFAP01135 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
TGFAP01135 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TGFAP01135 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.58■□□□□ 0.89
TGFAP01135 BHLHE23-202ENST00000612929 1109 ntBASIC20.58■□□□□ 0.89
TGFAP01135 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TGFAP01135 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TGFAP01135 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TGFAP01135 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TGFAP01135 RP9P-202ENST00000450133 1212 ntBASIC20.57■□□□□ 0.88
TGFAP01135 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TGFAP01135 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.56■□□□□ 0.88
TGFAP01135 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TGFAP01135 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TGFAP01135 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TGFAP01135 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TGFAP01135 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TGFAP01135 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.54■□□□□ 0.88
TGFAP01135 AC025884.2-201ENST00000553429 711 ntBASIC20.54■□□□□ 0.88
TGFAP01135 AC093536.1-201ENST00000569153 554 ntBASIC20.54■□□□□ 0.88
TGFAP01135 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TGFAP01135 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TGFAP01135 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.53■□□□□ 0.88
TGFAP01135 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.53■□□□□ 0.88
TGFAP01135 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TGFAP01135 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TGFAP01135 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TGFAP01135 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.52■□□□□ 0.88
TGFAP01135 DUX4L9-201ENST00000449051 1259 ntBASIC20.52■□□□□ 0.88
TGFAP01135 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFAP01135 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TGFAP01135 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TGFAP01135 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFAP01135 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFAP01135 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFAP01135 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFAP01135 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFAP01135 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFAP01135 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.51■□□□□ 0.87
TGFAP01135 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFAP01135 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFAP01135 ABCB10P3-201ENST00000561950 2166 ntBASIC20.5■□□□□ 0.87
TGFAP01135 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFAP01135 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
TGFAP01135 MIR3960-201ENST00000583311 91 ntBASIC20.49■□□□□ 0.87
TGFAP01135 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.49■□□□□ 0.87
TGFAP01135 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TGFAP01135 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.48■□□□□ 0.87
TGFAP01135 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFAP01135 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFAP01135 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFAP01135 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TGFAP01135 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TGFAP01135 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TGFAP01135 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TGFAP01135 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.47■□□□□ 0.87
TGFAP01135 AC139795.1-202ENST00000500444 432 ntBASIC20.47■□□□□ 0.87
TGFAP01135 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TGFAP01135 AL035685.1-201ENST00000636663 812 ntBASIC20.47■□□□□ 0.87
TGFAP01135 AL139393.2-201ENST00000608721 2025 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms