Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
SOD1P00441 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SOD1P00441 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SOD1P00441 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.84■■□□□ 1.57
SOD1P00441 AC060814.1-201ENST00000554326 538 ntBASIC24.84■■□□□ 1.57
SOD1P00441 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
SOD1P00441 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
SOD1P00441 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SOD1P00441 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SOD1P00441 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SOD1P00441 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.83■■□□□ 1.57
SOD1P00441 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SOD1P00441 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
SOD1P00441 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
SOD1P00441 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SOD1P00441 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
SOD1P00441 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.82■■□□□ 1.56
SOD1P00441 AC022413.1-201ENST00000624602 984 ntBASIC24.82■■□□□ 1.56
SOD1P00441 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SOD1P00441 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.82■■□□□ 1.56
SOD1P00441 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SOD1P00441 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SOD1P00441 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.81■■□□□ 1.56
SOD1P00441 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SOD1P00441 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SOD1P00441 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SOD1P00441 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SOD1P00441 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.8■■□□□ 1.56
SOD1P00441 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.8■■□□□ 1.56
SOD1P00441 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SOD1P00441 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SOD1P00441 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.79■■□□□ 1.56
SOD1P00441 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SOD1P00441 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SOD1P00441 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
SOD1P00441 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SOD1P00441 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
SOD1P00441 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.77■■□□□ 1.56
SOD1P00441 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SOD1P00441 LINC01003-201ENST00000564834 1764 ntBASIC24.76■■□□□ 1.55
SOD1P00441 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.76■■□□□ 1.55
SOD1P00441 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.76■■□□□ 1.55
SOD1P00441 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.76■■□□□ 1.55
SOD1P00441 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SOD1P00441 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SOD1P00441 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SOD1P00441 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
SOD1P00441 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.74■■□□□ 1.55
SOD1P00441 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.74■■□□□ 1.55
SOD1P00441 AC092296.2-201ENST00000589470 999 ntBASIC24.74■■□□□ 1.55
SOD1P00441 RNF126P1-201ENST00000567452 1320 ntBASIC24.74■■□□□ 1.55
SOD1P00441 AC142086.6-201ENST00000621154 1765 ntBASIC24.74■■□□□ 1.55
SOD1P00441 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.74■■□□□ 1.55
SOD1P00441 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SOD1P00441 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SOD1P00441 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SOD1P00441 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SOD1P00441 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SOD1P00441 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SOD1P00441 RARRES2P2-201ENST00000394842 485 ntBASIC24.73■■□□□ 1.55
SOD1P00441 AL359258.2-201ENST00000564063 1566 ntBASIC24.72■■□□□ 1.55
SOD1P00441 AL157400.5-201ENST00000507624 621 ntBASIC24.72■■□□□ 1.55
SOD1P00441 AC126177.7-201ENST00000547904 679 ntBASIC24.72■■□□□ 1.55
SOD1P00441 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SOD1P00441 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.7■■□□□ 1.55
SOD1P00441 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.7■■□□□ 1.55
SOD1P00441 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SOD1P00441 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.69■■□□□ 1.54
SOD1P00441 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SOD1P00441 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.68■■□□□ 1.54
SOD1P00441 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SOD1P00441 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.68■■□□□ 1.54
SOD1P00441 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SOD1P00441 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SOD1P00441 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SOD1P00441 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
SOD1P00441 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.66■■□□□ 1.54
SOD1P00441 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SOD1P00441 BX255925.1-201ENST00000566954 1854 ntBASIC24.66■■□□□ 1.54
SOD1P00441 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SOD1P00441 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOD1P00441 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SOD1P00441 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SOD1P00441 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SOD1P00441 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOD1P00441 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SOD1P00441 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SOD1P00441 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SOD1P00441 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SOD1P00441 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.63■■□□□ 1.53
SOD1P00441 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SOD1P00441 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SOD1P00441 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.63■■□□□ 1.53
SOD1P00441 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SOD1P00441 WHAMMP3-201ENST00000611636 1609 ntBASIC24.63■■□□□ 1.53
SOD1P00441 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
SOD1P00441 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SOD1P00441 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SOD1P00441 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SOD1P00441 ECEL1P2-201ENST00000461596 1295 ntBASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms