Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
BEST1O76090 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
BEST1O76090 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.46■■□□□ 1.83
BEST1O76090 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
BEST1O76090 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
BEST1O76090 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
BEST1O76090 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.45■■□□□ 1.82
BEST1O76090 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
BEST1O76090 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
BEST1O76090 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.45■■□□□ 1.82
BEST1O76090 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.44■■□□□ 1.82
BEST1O76090 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
BEST1O76090 GPX1-201ENST00000419349 1106 ntBASIC26.44■■□□□ 1.82
BEST1O76090 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.44■■□□□ 1.82
BEST1O76090 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.44■■□□□ 1.82
BEST1O76090 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
BEST1O76090 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
BEST1O76090 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
BEST1O76090 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
BEST1O76090 AC022413.1-201ENST00000624602 984 ntBASIC26.43■■□□□ 1.82
BEST1O76090 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
BEST1O76090 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
BEST1O76090 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
BEST1O76090 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.42■■□□□ 1.82
BEST1O76090 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
BEST1O76090 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
BEST1O76090 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
BEST1O76090 AC142086.6-201ENST00000621154 1765 ntBASIC26.41■■□□□ 1.82
BEST1O76090 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.4■■□□□ 1.82
BEST1O76090 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
BEST1O76090 AC060814.1-201ENST00000554326 538 ntBASIC26.4■■□□□ 1.82
BEST1O76090 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.4■■□□□ 1.82
BEST1O76090 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
BEST1O76090 LINC01003-201ENST00000564834 1764 ntBASIC26.4■■□□□ 1.82
BEST1O76090 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
BEST1O76090 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
BEST1O76090 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.39■■□□□ 1.82
BEST1O76090 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.39■■□□□ 1.82
BEST1O76090 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
BEST1O76090 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
BEST1O76090 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
BEST1O76090 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.38■■□□□ 1.81
BEST1O76090 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.38■■□□□ 1.81
BEST1O76090 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
BEST1O76090 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.37■■□□□ 1.81
BEST1O76090 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
BEST1O76090 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
BEST1O76090 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.36■■□□□ 1.81
BEST1O76090 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
BEST1O76090 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
BEST1O76090 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
BEST1O76090 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
BEST1O76090 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
BEST1O76090 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
BEST1O76090 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BEST1O76090 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.35■■□□□ 1.81
BEST1O76090 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.35■■□□□ 1.81
BEST1O76090 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
BEST1O76090 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.35■■□□□ 1.81
BEST1O76090 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.34■■□□□ 1.81
BEST1O76090 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
BEST1O76090 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BEST1O76090 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.33■■□□□ 1.81
BEST1O76090 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
BEST1O76090 AL359258.2-201ENST00000564063 1566 ntBASIC26.33■■□□□ 1.8
BEST1O76090 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.32■■□□□ 1.8
BEST1O76090 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
BEST1O76090 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BEST1O76090 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
BEST1O76090 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
BEST1O76090 BX255925.1-201ENST00000566954 1854 ntBASIC26.3■■□□□ 1.8
BEST1O76090 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.3■■□□□ 1.8
BEST1O76090 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BEST1O76090 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
BEST1O76090 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
BEST1O76090 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
BEST1O76090 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BEST1O76090 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.28■■□□□ 1.8
BEST1O76090 AC092296.2-201ENST00000589470 999 ntBASIC26.27■■□□□ 1.8
BEST1O76090 RNF126P1-201ENST00000567452 1320 ntBASIC26.27■■□□□ 1.8
BEST1O76090 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
BEST1O76090 AL157400.5-201ENST00000507624 621 ntBASIC26.26■■□□□ 1.79
BEST1O76090 AC126177.7-201ENST00000547904 679 ntBASIC26.26■■□□□ 1.79
BEST1O76090 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.26■■□□□ 1.79
BEST1O76090 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.25■■□□□ 1.79
BEST1O76090 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
BEST1O76090 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BEST1O76090 RARRES2P2-201ENST00000394842 485 ntBASIC26.25■■□□□ 1.79
BEST1O76090 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BEST1O76090 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
BEST1O76090 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
BEST1O76090 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BEST1O76090 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
BEST1O76090 WHAMMP3-201ENST00000611636 1609 ntBASIC26.23■■□□□ 1.79
BEST1O76090 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
BEST1O76090 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
BEST1O76090 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.23■■□□□ 1.79
BEST1O76090 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
BEST1O76090 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
BEST1O76090 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms